RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 DDX50Q9BQ39 737 aaKnown RBP12.38□□□□□ -0.43
ABCA3-203ENST00000563623 SYT15Q9BQS2 421 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 THTPAQ9BU02 230 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 TRIM4Q9C037 500 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 RABGEF1Q9UJ41 708 aa12.38□□□□□ -0.43
ABCA3-203ENST00000563623 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 OGDHQ02218 1023 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 SLC27A3Q5K4L6 730 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 ARID3BQ8IVW6 561 aaPredicted RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 UNC45BQ8IWX7 931 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 SMC1BQ8NDV3 1235 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 ACAP3Q96P50 834 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 MECRQ9BV79 373 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 SMYD3Q9H7B4 428 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 CLUHO75153 1309 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PMM2O15305 246 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 GSC2O15499 205 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 FAM155BO75949 473 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 VNN1O95497 513 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 TMEM191BP0C7N4 346 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 KRT3P12035 628 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 TBXAS1P24557 533 aaPredicted RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 CCND2P30279 289 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 INHBEP58166 350 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 MYL6P60660 151 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 WDR72Q3MJ13 1102 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 ACSBG2Q5FVE4 666 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 SCARA3Q6AZY7 606 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 RINLQ6ZS11 566 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PCGF5Q86SE9 256 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 ALYREFQ86V81 257 aaKnown RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 THNSL1Q8IYQ7 743 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 B4GALNT2Q8NHY0 566 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PAPOLBQ9NRJ5 636 aaKnown RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 HEY1Q9Y5J3 304 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 BTAF1O14981 1849 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 STRCQ7RTU9 1775 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 TYROBPO43914 113 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 AVILO75366 819 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 RNF8O76064 485 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 SRGAP2CP0DJJ0 459 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF200P98182 395 aaPredicted RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PTP4A2Q12974 167 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 BMPR2Q13873 1038 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 EMC2Q15006 297 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PSMD6Q15008 389 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 RASA2Q15283 850 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 KBTBD12Q3ZCT8 623 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 LRRC74BQ6ZQY2 392 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 MTMR12Q9C0I1 747 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 RMI1Q9H9A7 625 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PIDD1Q9HB75 910 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 PXMP2Q9NR77 195 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 LRRC42Q9Y546 428 aa12.37□□□□□ -0.43
ABCA3-203ENST00000563623 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.37□□□□□ -0.43
ABCA3-203ENST00000563623 ZNF541Q9H0D2 1346 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 MAGEB2O15479 319 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 C4BPAP04003 597 aaKnown RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CD48P09326 243 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 RFC1P35251 1148 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 GRIK3Q13003 919 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 PHF13Q86YI8 300 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 MYLK4Q86YV6 388 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CCDC60Q8IWA6 550 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 SPATA18Q8TC71 538 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 SLC7A3Q8WY07 619 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CPT1BQ92523 772 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 MRIQ9BWK5 157 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 XPNPEP1Q9NQW7 623 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 SAR1AQ9NR31 198 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 C2CD2Q9Y426 696 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 WASF2Q9Y6W5 498 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 KLRG2A4D1S0 409 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 KBTBD13C9JR72 458 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 TXNDC9O14530 226 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 TPD52L2O43399 206 aaKnown RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 TOM1L1O75674 476 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 LYPLA2O95372 231 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 PSMG1O95456 288 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CST3P01034 146 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 PIGHQ14442 188 aaPredicted RBP12.36□□□□□ -0.43
ABCA3-203ENST00000563623 EFHC2Q5JST6 749 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CFAP157Q5JU67 520 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 C1orf146Q5VVC0 180 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 TDRPQ86YL5 185 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CCDC33Q8N5R6 958 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CCDC110Q8TBZ0 833 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 WDR60Q8WVS4 1066 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 ATG4CQ96DT6 458 aa12.36□□□□□ -0.43
ABCA3-203ENST00000563623 CLPTM1LQ96KA5 538 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms