RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 ASIC1P78348 528 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 EHHADHQ08426 723 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 GRSF1Q12849 480 aaKnown RBP eCLIP22.43■■□□□ 1.18
CHD9-208ENST00000563410 USP4Q13107 963 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 MTF1Q14872 753 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 PDGFRLQ15198 375 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 NAIF1Q69YI7 327 aaPredicted RBP22.43■■□□□ 1.18
CHD9-208ENST00000563410 CC2D1AQ6P1N0 951 aaPredicted RBP22.43■■□□□ 1.18
CHD9-208ENST00000563410 C4orf50Q6ZRC1 276 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 TRAPPC11Q7Z392 1133 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 MYLPFQ96A32 169 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 ZNF396Q96N95 335 aaPredicted RBP22.43■■□□□ 1.18
CHD9-208ENST00000563410 C7orf25Q9BPX7 421 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 KIAA1586Q9HCI6 787 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 AGPAT3Q9NRZ7 376 aa22.43■■□□□ 1.18
CHD9-208ENST00000563410 MAGEC2Q9UBF1 373 aaPredicted RBP22.43■■□□□ 1.18
CHD9-208ENST00000563410 CDV3Q9UKY7 258 aaKnown RBP22.43■■□□□ 1.18
CHD9-208ENST00000563410 R3HCC1Q9Y3T6 440 aaKnown RBP22.43■■□□□ 1.18
CHD9-208ENST00000563410 C2orf78A6NCI8 922 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 CUTAO60888 179 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 YEATS4O95619 227 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 CST3P01034 146 aaPredicted RBP22.42■■□□□ 1.18
CHD9-208ENST00000563410 USP17L7P0C7H9 530 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 GJA4P35212 333 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 GALK1P51570 392 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 AMPD3Q01432 767 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 FAM26FQ5R3K3 315 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.42■■□□□ 1.18
CHD9-208ENST00000563410 ARL14EPQ8N8R7 260 aaPredicted RBP22.42■■□□□ 1.18
CHD9-208ENST00000563410 RDH13Q8NBN7 331 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 OSCP1Q8WVF1 389 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 SPATA17Q96L03 361 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 RTKNQ9BST9 563 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 ECT2Q9H8V3 914 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 SEMA4GQ9NTN9 838 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 NME7Q9Y5B8 376 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 MYOFQ9NZM1 2061 aa22.42■■□□□ 1.18
CHD9-208ENST00000563410 CNOT1A5YKK6 2376 aaKnown RBP22.41■■□□□ 1.18
CHD9-208ENST00000563410 TRAV19A0A0A6YYK7 116 aa22.41■■□□□ 1.18
CHD9-208ENST00000563410 PDGFRBP09619 1106 aa22.41■■□□□ 1.18
CHD9-208ENST00000563410 BDNFP23560 247 aa22.41■■□□□ 1.18
CHD9-208ENST00000563410 PXNP49023 591 aaPredicted RBP22.41■■□□□ 1.18
CHD9-208ENST00000563410 SNRNP35Q16560 246 aaKnown RBP22.41■■□□□ 1.18
CHD9-208ENST00000563410 VSTM1Q6UX27 236 aa22.41■■□□□ 1.18
CHD9-208ENST00000563410 FAM160A2Q8N612 972 aaPredicted RBP22.41■■□□□ 1.18
CHD9-208ENST00000563410 IQUBQ8NA54 791 aa22.41■■□□□ 1.18
CHD9-208ENST00000563410 POLR3BQ9NW08 1133 aaPredicted RBP22.41■■□□□ 1.18
CHD9-208ENST00000563410 DUS2Q9NX74 493 aaKnown RBP22.41■■□□□ 1.18
CHD9-208ENST00000563410 DCDC2BA2VCK2 349 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 CLIC2O15247 247 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 RNF40O75150 1001 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 CKMP06732 381 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 CASP1P29466 404 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 USP46P62068 366 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 AMPD2Q01433 879 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 MAPRE1Q15691 268 aaKnown RBP22.4■■□□□ 1.18
CHD9-208ENST00000563410 CSRP2Q16527 193 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 EML3Q32P44 896 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 PRR23CQ6ZRP0 262 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 UNC13DQ70J99 1090 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 CEP68Q76N32 757 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 FSIP1Q8NA03 581 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 SCFD1Q8WVM8 642 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 EZH1Q92800 747 aaPredicted RBP22.4■■□□□ 1.18
CHD9-208ENST00000563410 PCED1BQ96HM7 432 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 MMS19Q96T76 1030 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 CGRRF1Q99675 332 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 P2RY13Q9BPV8 354 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 MRPL45Q9BRJ2 306 aaKnown RBP22.4■■□□□ 1.18
CHD9-208ENST00000563410 GZF1Q9H116 711 aaPredicted RBP22.4■■□□□ 1.18
CHD9-208ENST00000563410 WNT6Q9Y6F9 365 aa22.4■■□□□ 1.18
CHD9-208ENST00000563410 UBE4BO95155 1302 aa22.39■■□□□ 1.18
CHD9-208ENST00000563410 CCDC163A0A0D9SF12 145 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 ATG13O75143 517 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 DLATP10515 647 aaKnown RBP22.39■■□□□ 1.17
CHD9-208ENST00000563410 TCF3P15923 654 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 DRD1P21728 446 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 CYP2J2P51589 502 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 ZXDBP98169 803 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 CYP24A1Q07973 514 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 PSMD6Q15008 389 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 FOXD4L5Q5VV16 416 aaPredicted RBP22.39■■□□□ 1.17
CHD9-208ENST00000563410 NELFCDQ8IXH7 590 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 CPA6Q8N4T0 437 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 TTC16Q8NEE8 873 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 SH3RF2Q8TEC5 729 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 FOXD4L4Q8WXT5 416 aaPredicted RBP22.39■■□□□ 1.17
CHD9-208ENST00000563410 ZNF516Q92618 1163 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 CEP295NLQ96MC4 621 aa22.39■■□□□ 1.17
CHD9-208ENST00000563410 POLR2DO15514 142 aaKnown RBP22.38■■□□□ 1.17
CHD9-208ENST00000563410 TACC1O75410 805 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 HDCP19113 662 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 TNNI1P19237 187 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 GRIK1P39086 918 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 IFNAR2P48551 515 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 CYP27A1Q02318 531 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 KCNB1Q14721 858 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 DENND5BQ6ZUT9 1274 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 XXYLT1Q8NBI6 393 aa22.38■■□□□ 1.17
CHD9-208ENST00000563410 MYCBPAPQ8TBZ2 947 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms