RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PSMC1P62191 440 aaKnown RBP18■□□□□ 0.47
HDGFL3-203ENST00000563404 ZXDBP98169 803 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 SLC39A14Q15043 492 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 EML3Q32P44 896 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 CBWD2Q8IUF1 395 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 PDILTQ8N807 584 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 TTC16Q8NEE8 873 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 FUBP3Q96I24 572 aaKnown RBP eCLIP18■□□□□ 0.47
HDGFL3-203ENST00000563404 LINC00597Q9H2U6 94 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 SMOC1Q9H4F8 434 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 TMEM206Q9H813 350 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 MTMR6Q9Y217 621 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 ANAPC1Q9H1A4 1944 aa18■□□□□ 0.47
HDGFL3-203ENST00000563404 TRAV19A0A0A6YYK7 116 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 ANTXRLA6NF34 631 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 KRT37O76014 449 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 USP17L7P0C7H9 530 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 PCSK1P29120 753 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 MAGEA11P43364 429 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 USP46P62068 366 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 PLA2G2CQ5R387 149 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 CPA6Q8N4T0 437 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 RPLP0P6Q8NHW5 317 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 SH3RF2Q8TEC5 729 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 MYLPFQ96A32 169 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 HPDLQ96IR7 371 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 ANKRD36BP1Q96IX9 119 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 LOXL4Q96JB6 756 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 SYT15Q9BQS2 421 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 NME7Q9Y5B8 376 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 GREB1Q4ZG55 1949 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 ZFHX4Q86UP3 3567 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 CACNA1BQ00975 2339 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 LAMA1P25391 3075 aa17.99■□□□□ 0.47
HDGFL3-203ENST00000563404 TM4SF5O14894 197 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 CKMP06732 381 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 ZNF806P0C7X5 589 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 CCDC192P0DO97 292 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 AMPD2Q01433 879 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 E2F4Q16254 413 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 AASDHQ4L235 1098 aaPredicted RBP17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 DPH6Q7L8W6 267 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 CAMKK1Q8N5S9 505 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 CD101Q93033 1021 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 ZC3H10Q96K80 434 aaKnown RBP17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 HSPBP1Q9NZL4 362 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 CDH9Q9ULB4 789 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 SPAG17Q6Q759 2223 aa17.98■□□□□ 0.47
HDGFL3-203ENST00000563404 ZNF233A6NK53 670 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 DCLK1O15075 740 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 FOXD2O60548 495 aaPredicted RBP17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 AKAP3O75969 853 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 PDGFRBP09619 1106 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 TCF3P15923 654 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 BDNFP23560 247 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 IFNAR2P48551 515 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 NASPP49321 788 aaPredicted RBP17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 LIMK1P53667 647 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 MYO1EQ12965 1108 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 GAB4Q2WGN9 574 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 PLK5Q496M5 336 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 FBXO43Q4G163 708 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 SYT13Q7L8C5 426 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 CCDC65Q8IXS2 484 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 ATP2A3Q93084 1043 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 SPATA17Q96L03 361 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 DUSP15Q9H1R2 295 aaPredicted RBP17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 MAGEC2Q9UBF1 373 aaPredicted RBP17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 ARHGAP26Q9UNA1 814 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 CHD8Q9HCK8 2581 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 KIAA1549LQ6ZVL6 1849 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 MYO16Q9Y6X6 1858 aa17.97■□□□□ 0.47
HDGFL3-203ENST00000563404 KIAA0391O15091 583 aaKnown RBP17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 CST3P01034 146 aaPredicted RBP17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 TNNC2P02585 160 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 HDCP19113 662 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 WARSP23381 471 aaKnown RBP17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 DMC1Q14565 340 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 DUOXA2Q1HG44 320 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 VSTM1Q6UX27 236 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 C4orf50Q6ZRC1 276 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 EPM2AIP1Q7L775 607 aaPredicted RBP17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 MRPL45Q9BRJ2 306 aaKnown RBP17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 TRIM9Q9C026 710 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 TMEM30AQ9NV96 361 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 KBTBD4Q9NVX7 518 aa17.96■□□□□ 0.47
HDGFL3-203ENST00000563404 TGFB1I1O43294 461 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 GRIK1P39086 918 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 OPRD1P41143 372 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 CACNA2D1P54289 1103 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 CYP27A1Q02318 531 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 KCNB1Q14721 858 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 TCEAL6Q6IPX3 200 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 TRAPPC11Q7Z392 1133 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 WDR49Q8IV35 697 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 C12orf50Q8NA57 414 aaPredicted RBP17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 RDH13Q8NBN7 331 aa17.95■□□□□ 0.46
HDGFL3-203ENST00000563404 LINC00301Q8NCQ3 95 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms