RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 CCDC105Q8IYK2 499 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 CMTM8Q8IZV2 173 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 DTWD2Q8NBA8 298 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 TAS1R2Q8TE23 839 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 MRPS31Q92665 395 aaKnown RBP20.27■□□□□ 0.84
TRADD-203ENST00000563348 C8orf48Q96LL4 319 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 FOXQ1Q9C009 403 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 TMEM8AQ9HCN3 771 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 HEBP1Q9NRV9 189 aa20.27■□□□□ 0.84
TRADD-203ENST00000563348 CHADO15335 359 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 LRRC63Q05C16 580 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 STIM1Q13586 685 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 KRT39Q6A163 491 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 TXNDC8Q6A555 127 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 SPOPLQ6IQ16 392 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 YAF2Q8IY57 180 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 PJA1Q8NG27 643 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 DHTKD1Q96HY7 919 aaPredicted RBP20.26■□□□□ 0.83
TRADD-203ENST00000563348 TNIP3Q96KP6 325 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 NELL2Q99435 816 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 B3GNT5Q9BYG0 378 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 OSBPL6Q9BZF3 934 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 ELOVL4Q9GZR5 314 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 DLGAP2Q9P1A6 1054 aa20.26■□□□□ 0.83
TRADD-203ENST00000563348 ARNTLO00327 626 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 PSMA7O14818 248 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 TRIM66O15016 1216 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 TADA3O75528 432 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 PRAMEF12O95522 483 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 CCNE1P24864 410 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 ANXA13P27216 316 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 ANP32AP39687 249 aaKnown RBP20.25■□□□□ 0.83
TRADD-203ENST00000563348 PPP1R2P41236 205 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 ASPAP45381 313 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 UBE2HP62256 183 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 TPRG1Q6ZUI0 275 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 DENND5BQ6ZUT9 1274 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 UNC93AQ86WB7 457 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 CRYBG2Q8N1P7 616 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 CELF5Q8N6W0 485 aaKnown RBP20.25■□□□□ 0.83
TRADD-203ENST00000563348 MAB21L3Q8N8X9 362 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 IMPG2Q9BZV3 1241 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 ZNF518BQ9C0D4 1074 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 MMRN2Q9H8L6 949 aa20.25■□□□□ 0.83
TRADD-203ENST00000563348 APOBEC3GQ9HC16 384 aaKnown RBP20.25■□□□□ 0.83
TRADD-203ENST00000563348 SHISA7A6NL88 538 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 FAM170BA6NMN3 283 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 F8VP50 259 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 H0Y858 1186 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 CLDN5O00501 218 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 SLC16A3O15427 465 aaKnown RBP20.24■□□□□ 0.83
TRADD-203ENST00000563348 STX10O60499 249 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 DCNP07585 359 aaKnown RBP20.24■□□□□ 0.83
TRADD-203ENST00000563348 CD44P16070 742 aaKnown RBP20.24■□□□□ 0.83
TRADD-203ENST00000563348 CD72P21854 359 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 BMP6P22004 513 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 AVPR1AP37288 418 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 ARHGAP29Q52LW3 1261 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 ZNF852Q6ZMS4 543 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 BPIFB1Q8TDL5 484 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 TTLL2Q9BWV7 592 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 BCO2Q9BYV7 579 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 SMG9Q9H0W8 520 aaKnown RBP20.24■□□□□ 0.83
TRADD-203ENST00000563348 CYP3A43Q9HB55 503 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 LTB4R2Q9NPC1 389 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.24■□□□□ 0.83
TRADD-203ENST00000563348 TMEM30AQ9NV96 361 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 EHD2Q9NZN4 543 aa20.24■□□□□ 0.83
TRADD-203ENST00000563348 MTF2Q9Y483 593 aaPredicted RBP20.24■□□□□ 0.83
TRADD-203ENST00000563348 TRIM49BA6NDI0 452 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 PPP1R3GB7ZBB8 358 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 MAN2B1O00754 1011 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 GLULP15104 373 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 NDST1P52848 882 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 CACNA2D1P54289 1103 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 MLLT6P55198 1093 aaPredicted RBP20.23■□□□□ 0.83
TRADD-203ENST00000563348 USP46P62068 366 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 NOP14P78316 857 aaKnown RBP20.23■□□□□ 0.83
TRADD-203ENST00000563348 MORC3Q14149 939 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 UBXN2BQ14CS0 331 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 PAQR9Q6ZVX9 377 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 ACOT1Q86TX2 421 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 CCDC150Q8NCX0 1101 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 USP13Q92995 863 aaPredicted RBP20.23■□□□□ 0.83
TRADD-203ENST00000563348 TDP1Q9NUW8 608 aa20.23■□□□□ 0.83
TRADD-203ENST00000563348 MRPS17Q9Y2R5 130 aaKnown RBP20.23■□□□□ 0.83
TRADD-203ENST00000563348 LRRN2O75325 713 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 MXI1P50539 228 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 PLCB2Q00722 1185 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 INCA1Q0VD86 236 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 ZNF268Q14587 947 aaPredicted RBP20.22■□□□□ 0.83
TRADD-203ENST00000563348 FBXL13Q8NEE6 735 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 CSGALNACT1Q8TDX6 532 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 SEMA4DQ92854 862 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 ATOH1Q92858 354 aaPredicted RBP20.22■□□□□ 0.83
TRADD-203ENST00000563348 FAXDC2Q96IV6 333 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 NIF3L1Q9GZT8 377 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 THG1LQ9NWX6 298 aaKnown RBP20.22■□□□□ 0.83
TRADD-203ENST00000563348 RAB20Q9NX57 234 aa20.22■□□□□ 0.83
TRADD-203ENST00000563348 ATP8B3O60423 1300 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms