RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 LRRC3Q9BY71 257 aa18.22■□□□□ 0.51
IRF8-203ENST00000563180 CBX8Q9HC52 389 aa18.22■□□□□ 0.51
IRF8-203ENST00000563180 ZNF334Q9HCZ1 680 aaPredicted RBP18.22■□□□□ 0.51
IRF8-203ENST00000563180 CD320Q9NPF0 282 aa18.22■□□□□ 0.51
IRF8-203ENST00000563180 C5orf42Q9H799 3197 aa18.22■□□□□ 0.51
IRF8-203ENST00000563180 MYH10P35580 1976 aa18.22■□□□□ 0.51
IRF8-203ENST00000563180 SLC38A8A6NNN8 435 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 F8VP50 259 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 ZNF197O14709 1029 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 TRIM66O15016 1216 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 ATP1A3P13637 1013 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 ACO1P21399 889 aaKnown RBP18.21■□□□□ 0.51
IRF8-203ENST00000563180 ANXA13P27216 316 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 ADORA2BP29275 332 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 CCR2P41597 374 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 EPHA5P54756 1037 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 MTMR3Q13615 1198 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 PRSS36Q5K4E3 855 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 TMC8Q8IU68 726 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 GJD3Q8N144 294 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 LEMD2Q8NC56 503 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 C8orf48Q96LL4 319 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 SIX2Q9NPC8 291 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 TMEM30AQ9NV96 361 aa18.21■□□□□ 0.51
IRF8-203ENST00000563180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.21■□□□□ 0.51
IRF8-203ENST00000563180 MAGED2Q9UNF1 606 aaPredicted RBP18.21■□□□□ 0.51
IRF8-203ENST00000563180 GREB1Q4ZG55 1949 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 AP1G2O75843 785 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 CSH1P0DML2 217 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 CSH2P0DML3 217 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 HMGA1P17096 107 aaKnown RBP18.2■□□□□ 0.5
IRF8-203ENST00000563180 GJA1P17302 382 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 MFAP3P55082 362 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 KCNMA1Q12791 1236 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 TMEM270Q6UE05 265 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 PLCD3Q8N3E9 789 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 SMARCD1Q96GM5 515 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 SPATA17Q96L03 361 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 HNRNPABQ99729 332 aaKnown RBP18.2■□□□□ 0.5
IRF8-203ENST00000563180 COL25A1Q9BXS0 654 aaPredicted RBP18.2■□□□□ 0.5
IRF8-203ENST00000563180 APEX2Q9UBZ4 518 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 CDH7Q9ULB5 785 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 DOCK8Q8NF50 2099 aa18.2■□□□□ 0.5
IRF8-203ENST00000563180 LRRC10BA6NIK2 292 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 RNF225M0QZC1 329 aaPredicted RBP18.19■□□□□ 0.5
IRF8-203ENST00000563180 NRG2O14511 850 aaPredicted RBP18.19■□□□□ 0.5
IRF8-203ENST00000563180 MOSPD3O75425 235 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 NOL4O94818 638 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 CAVIN2O95810 425 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 CEBPBP17676 345 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 ARHGAP44Q17R89 818 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 FKBP15Q5T1M5 1219 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 PPP1R26Q5T8A7 1209 aaPredicted RBP18.19■□□□□ 0.5
IRF8-203ENST00000563180 ENOSF1Q7L5Y1 443 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 LUZP1Q86V48 1076 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 ZDHHC14Q8IZN3 488 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 RBBP8NLQ8NC74 664 aaPredicted RBP18.19■□□□□ 0.5
IRF8-203ENST00000563180 SHKBP1Q8TBC3 707 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 FGF13Q92913 245 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 MCRS1Q96EZ8 462 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 FAM81BQ96LP2 452 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 KCNK16Q96T55 309 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 KRT82Q9NSB4 513 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 LIMD1Q9UGP4 676 aa18.19■□□□□ 0.5
IRF8-203ENST00000563180 A0A1W2PRU2 124 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 FGF19O95750 216 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 FAM200BP0CF97 657 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 LAMP2P13473 410 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 CD19P15391 556 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 GABRR2P28476 465 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 DPY19L2P1Q6NXN4 242 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 GAREM2Q75VX8 874 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 APTXQ7Z2E3 356 aaKnown RBP18.18■□□□□ 0.5
IRF8-203ENST00000563180 NPAS3Q8IXF0 933 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 JAKMIP2Q96AA8 810 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 CEP295NLQ96MC4 621 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 SMOQ99835 787 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 LSM14BQ9BX40 385 aaKnown RBP18.18■□□□□ 0.5
IRF8-203ENST00000563180 ATXN3LQ9H3M9 355 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 IL21Q9HBE4 155 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 DMAP1Q9NPF5 467 aaPredicted RBP18.18■□□□□ 0.5
IRF8-203ENST00000563180 EPS15L1Q9UBC2 864 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 DNAJC12Q9UKB3 198 aa18.18■□□□□ 0.5
IRF8-203ENST00000563180 LGALS16A8MUM7 142 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 BEST1O76090 585 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 MICAL2O94851 1124 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 PAEPP09466 180 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 VDRP11473 427 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 KRT5P13647 590 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 MAP3K7CLP57077 242 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 TEAD2Q15562 447 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 SGO2Q562F6 1265 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 ARHGAP17Q68EM7 881 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 LRSAM1Q6UWE0 723 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 DENND5BQ6ZUT9 1274 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 RNF135Q8IUD6 432 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 ZMIZ2Q8NF64 920 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 AJAP1Q9UKB5 411 aaPredicted RBP18.17■□□□□ 0.5
IRF8-203ENST00000563180 KIAA1257Q9ULG3 409 aa18.17■□□□□ 0.5
IRF8-203ENST00000563180 ZFP37Q9Y6Q3 630 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms