RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 TMC8Q8IU68 726 aa18.54■□□□□ 0.56
CCNDBP1-204ENST00000563065 CYFIP2Q96F07 1278 aa18.54■□□□□ 0.56
CCNDBP1-204ENST00000563065 UHRF1Q96T88 793 aaPredicted RBP18.54■□□□□ 0.56
CCNDBP1-204ENST00000563065 PRKAG3Q9UGI9 489 aa18.54■□□□□ 0.56
CCNDBP1-204ENST00000563065 MAGED2Q9UNF1 606 aaPredicted RBP18.54■□□□□ 0.56
CCNDBP1-204ENST00000563065 LRRC10BA6NIK2 292 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 LOC730098B7Z3J9 87 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 MOSPD3O75425 235 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 HMGA1P17096 107 aaKnown RBP18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 GBP2P32456 591 aaPredicted RBP18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 RPL10AP62906 217 aaKnown RBP18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 PTPN21Q16825 1174 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 ARHGAP44Q17R89 818 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 PRSS36Q5K4E3 855 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 VSTM1Q6UX27 236 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 ASAH2Q9NR71 780 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 APEX2Q9UBZ4 518 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 MRPS23Q9Y3D9 190 aaKnown RBP18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 DENND4AQ7Z401 1863 aa18.53■□□□□ 0.56
CCNDBP1-204ENST00000563065 C19orf67A6NJJ6 358 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 SLC38A8A6NNN8 435 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 AP1G2O75843 785 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 CEBPBP17676 345 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 SSTR3P32745 418 aaPredicted RBP18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 USP46P62068 366 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 YWHAEP62258 255 aaKnown RBP18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 VEPH1Q14D04 833 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 CYP4A22Q5TCH4 519 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 LRSAM1Q6UWE0 723 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 GAREM2Q75VX8 874 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 PDZD4Q76G19 769 aaPredicted RBP18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 TTC39CQ8N584 583 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 ZMIZ2Q8NF64 920 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 ANKRD20A12PQ8NF67 263 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 HNRNPABQ99729 332 aaKnown RBP18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 SMOQ99835 787 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 LSM14BQ9BX40 385 aaKnown RBP18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 KRT82Q9NSB4 513 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 ASB3Q9Y575 518 aa18.52■□□□□ 0.56
CCNDBP1-204ENST00000563065 A0A1W2PRU2 124 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 TPM2P07951 284 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 CD19P15391 556 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 EPHA5P54756 1037 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 MAP3K7CLP57077 242 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 TAF12Q16514 161 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 KLHDC7AQ5VTJ3 777 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 ITIH5Q86UX2 942 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 GJD3Q8N144 294 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 RBBP8NLQ8NC74 664 aaPredicted RBP18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 SHKBP1Q8TBC3 707 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 TFAP2BQ92481 460 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 FGF13Q92913 245 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 MCRS1Q96EZ8 462 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 ZSWIM1Q9BR11 485 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 COL25A1Q9BXS0 654 aaPredicted RBP18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 IL21Q9HBE4 155 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 ACP6Q9NPH0 428 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 LIMD1Q9UGP4 676 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 DNAJC12Q9UKB3 198 aa18.52■□□□□ 0.55
CCNDBP1-204ENST00000563065 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 TRIM66O15016 1216 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 TEX33O43247 280 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 PNMA6AP0CW24 399 aaPredicted RBP18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 KRT5P13647 590 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 GABRR2P28476 465 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 MFAP3P55082 362 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 UBXN1Q04323 297 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 TEAD2Q15562 447 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 STXBP5Q5T5C0 1151 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 OTOP3Q7RTS5 596 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 TDRD5Q8NAT2 981 aaKnown RBP18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 SMARCD1Q96GM5 515 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 SPATA17Q96L03 361 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 C8orf48Q96LL4 319 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 ZSWIM3Q96MP5 696 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 FAM124BQ9H5Z6 455 aaPredicted RBP18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 AVENQ9NQS1 362 aaPredicted RBP18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 USTQ9Y2C2 406 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 NR2E1Q9Y466 385 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 FHOD1Q9Y613 1164 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 DOCK8Q8NF50 2099 aa18.51■□□□□ 0.55
CCNDBP1-204ENST00000563065 TTC28Q96AY4 2481 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 EPHB6O15197 1021 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 FAM200BP0CF97 657 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 CSH1P0DML2 217 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 CSH2P0DML3 217 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 ANXA13P27216 316 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 USP8P40818 1118 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 ZNF132P52740 706 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 IFRD2Q12894 506 aaPredicted RBP18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 FKBP15Q5T1M5 1219 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 CLEC20AQ6ZU45 233 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 TMEM150AQ86TG1 271 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 GPIHBP1Q8IV16 184 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 NPAS3Q8IXF0 933 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 SCAMP5Q8TAC9 235 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 JAKMIP2Q96AA8 810 aa18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 NAP1L5Q96NT1 182 aaPredicted RBP18.5■□□□□ 0.55
CCNDBP1-204ENST00000563065 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms