RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 MTCL1Q9Y4B5 1905 aaKnown RBP6.29□□□□□ -1.4
CDH13-206ENST00000562601 C2orf16Q68DN1 1984 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 FAM237AA0A1B0GTK4 181 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 PVALEFA0A1B0GWK0 134 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TTC26A0AVF1 554 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 METTL12A8MUP2 240 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 PPEF2O14830 753 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TEX28O15482 410 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 ADAM12O43184 909 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TGFB1I1O43294 461 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 NCK2O43639 380 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 B3GAT3O94766 335 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 EFEMP2O95967 443 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 URODP06132 367 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 NFICP08651 508 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 SCP2P22307 547 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TKTP29401 623 aaKnown RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 ABCD1P33897 745 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 CYP2J2P51589 502 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 CDR1P51861 262 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 DSG1Q02413 1049 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 STK4Q13043 487 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 PNOCQ13519 176 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 SNW1Q13573 536 aaKnown RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 GRM2Q14416 872 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 BMS1Q14692 1282 aaKnown RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 COL19A1Q14993 1142 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TMEM132DQ14C87 1099 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 AAK1Q2M2I8 961 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 USP41Q3LFD5 358 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 RPS26P11Q5JNZ5 115 aaPredicted RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 RTP2Q5QGT7 225 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 HP1BP3Q5SSJ5 553 aaPredicted RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 RARS2Q5T160 578 aaKnown RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 LMBRD2Q68DH5 695 aaPredicted RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 SLFN12LQ6IEE8 588 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 ANKRD54Q6NXT1 300 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 ARMCX5Q6P1M9 558 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 CNNM4Q6P4Q7 775 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 EPM2AIP1Q7L775 607 aaPredicted RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 EPS8L3Q8TE67 593 aaKnown RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 SLC22A17Q8WUG5 538 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 SCFD1Q8WVM8 642 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 KCNN1Q92952 543 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 MSLNLQ96KJ4 702 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 UROC1Q96N76 676 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 CDCA3Q99618 268 aaPredicted RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 TTPALQ9BTX7 342 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 EMILIN2Q9BXX0 1053 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TMEM206Q9H813 350 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 PLEKHA5Q9HAU0 1116 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TPSG1Q9NRR2 321 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 CHST7Q9NS84 486 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 EXOC1Q9NV70 894 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 SLC38A7Q9NVC3 462 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 CHMP5Q9NZZ3 219 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 USP25Q9UHP3 1055 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 CD207Q9UJ71 328 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 TIMM13Q9Y5L4 95 aaPredicted RBP6.28□□□□□ -1.4
CDH13-206ENST00000562601 HCFC2Q9Y5Z7 792 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 DOCK6Q96HP0 2047 aa6.28□□□□□ -1.4
CDH13-206ENST00000562601 SF3B1O75533 1304 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDH13-206ENST00000562601 CUL9Q8IWT3 2517 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 TMEM238LA0A1B0GVL6 79 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 TM4SF5O14894 197 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 GIPC1O14908 333 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 EIF3DO15371 548 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDH13-206ENST00000562601 MBTPS2O43462 519 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 EXTL3O43909 919 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 PRPF40AO75400 957 aaKnown RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 GLB1P16278 677 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 GARTP22102 1010 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 SP100P23497 879 aaPredicted RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 RPL9P32969 192 aaKnown RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 MCM4P33991 863 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 CLCN4P51793 760 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 ARPP19P56211 112 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 NLRP12P59046 1061 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 TFAMQ00059 246 aaKnown RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 GSTM4Q03013 218 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 ALCAMQ13740 583 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 KCNC3Q14003 757 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 POSTNQ15063 836 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 ZBTB6Q15916 424 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 PSMD5Q16401 504 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 KYAT1Q16773 422 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 SPRED3Q2MJR0 410 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 ISM2Q6H9L7 571 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 SYCE2Q6PIF2 218 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 RSPO2Q6UXX9 243 aaPredicted RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 Q6ZS46 218 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 STXBP4Q6ZWJ1 553 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 CBWD2Q8IUF1 395 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 EFCAB13Q8IY85 973 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 SMYD4Q8IYR2 804 aaPredicted RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 RNF168Q8IYW5 571 aaPredicted RBP6.27□□□□□ -1.41
CDH13-206ENST00000562601 GPD1LQ8N335 351 aa6.27□□□□□ -1.41
CDH13-206ENST00000562601 KIAA0895Q8NCT3 520 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms