RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 SYCE2Q6PIF2 218 aa23.84■■□□□ 1.41
SYNGR3-202ENST00000562045 DPH6Q7L8W6 267 aa23.84■■□□□ 1.41
SYNGR3-202ENST00000562045 NOP9Q86U38 636 aaKnown RBP23.84■■□□□ 1.41
SYNGR3-202ENST00000562045 TMEM86AQ8N2M4 240 aa23.84■■□□□ 1.41
SYNGR3-202ENST00000562045 MSLNLQ96KJ4 702 aa23.84■■□□□ 1.41
SYNGR3-202ENST00000562045 LPIN3Q9BQK8 851 aa23.84■■□□□ 1.41
SYNGR3-202ENST00000562045 TMLHEQ9NVH6 421 aa23.84■■□□□ 1.41
SYNGR3-202ENST00000562045 VCANP13611 3396 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 ARHGEF37A1IGU5 675 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 ATP2C2O75185 946 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 WARSP23381 471 aaKnown RBP23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 CDR2Q01850 454 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 CYP27A1Q02318 531 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 INCA1Q0VD86 236 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 TXLNBQ8N3L3 684 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 SLC20A1Q8WUM9 679 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 ZCWPW1Q9H0M4 648 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 CRISPLD1Q9H336 500 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 ACP6Q9NPH0 428 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 FBXW11Q9UKB1 542 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 C2orf16Q68DN1 1984 aa23.83■■□□□ 1.41
SYNGR3-202ENST00000562045 OR6C75A6NL08 312 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 DDX3XO00571 662 aaKnown RBP eCLIP23.82■■□□□ 1.42e-10■■■■■ 55.9
SYNGR3-202ENST00000562045 NCK2O43639 380 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 CILPO75339 1184 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 TACC1O75410 805 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 RFPL2O75678 378 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 SEC24AO95486 1093 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 PDGFRBP09619 1106 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 CPB1P15086 417 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 GNA15P30679 374 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 C10orf76Q5T2E6 689 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 ANKRD54Q6NXT1 300 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 REXO1L1PQ8IX06 675 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 KREMEN2Q8NCW0 462 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 ZNF461Q8TAF7 563 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 HMGXB4Q9UGU5 601 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 NAGPAQ9UK23 515 aa23.82■■□□□ 1.4
SYNGR3-202ENST00000562045 SLC39A12Q504Y0 691 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 ALKBH5Q6P6C2 394 aaKnown RBP23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 KIAA1328Q86T90 577 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 THEM5Q8N1Q8 247 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 TTC9BQ8N6N2 239 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 SLC30A5Q8TAD4 765 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 OLIG1Q8TAK6 271 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 DDX1Q92499 740 aaKnown RBP23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 CASP10Q92851 521 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 PKMYT1Q99640 499 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 DPEP3Q9H4B8 488 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 SEPT11Q9NVA2 429 aaKnown RBP23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 PCDHA13Q9Y5I0 950 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 DOCK6Q96HP0 2047 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 VAV2P52735 878 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 PSMC1P62191 440 aaKnown RBP23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 ORC1Q13415 861 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 ZNF394Q53GI3 561 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 TAF3Q5VWG9 929 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 OR6B3Q8NGW1 331 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 ACBD6Q9BR61 282 aa23.81■■□□□ 1.4
SYNGR3-202ENST00000562045 PAEPP09466 180 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 ATF2P15336 505 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 GNL1P36915 607 aaPredicted RBP23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 MAGEA1P43355 309 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 LHX1P48742 406 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 ADCY1Q08828 1119 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 GPR17Q13304 367 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 CCDC122Q5T0U0 273 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 S1PR5Q9H228 398 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 CRTAC1Q9NQ79 661 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 NENFQ9UMX5 172 aa23.8■■□□□ 1.4
SYNGR3-202ENST00000562045 MYBPHLA2RUH7 354 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 MTMR11A4FU01 709 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 MMEP08473 750 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 CHRNB2P17787 502 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 FMO1Q01740 532 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 ARHGAP29Q52LW3 1261 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 INTS6LQ5JSJ4 861 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 ZNF662Q6ZS27 426 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 ATAD1Q8NBU5 361 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 WHAMMQ8TF30 809 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 TWNKQ96RR1 684 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 SNX25Q9H3E2 840 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 GTF3C4Q9UKN8 822 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 THAP12O43422 761 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 FAM163BP0C2L3 166 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 RAD23BP54727 409 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 TMC5Q6UXY8 1006 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 SLC7A14Q8TBB6 771 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 SPATA18Q8TC71 538 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 TMEM176AQ96HP8 235 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 SYT15Q9BQS2 421 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 NT5C1AQ9BXI3 368 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 OXCT2Q9BYC2 517 aaPredicted RBP23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 AFF4Q9UHB7 1163 aaKnown RBP23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 COG5Q9UP83 839 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 SLC27A5Q9Y2P5 690 aa23.79■■□□□ 1.4
SYNGR3-202ENST00000562045 PTPRDP23468 1912 aa23.78■■□□□ 1.4
SYNGR3-202ENST00000562045 A8MXQ7 604 aa23.78■■□□□ 1.4
SYNGR3-202ENST00000562045 SOAT2O75908 522 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms