RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MORC2Q9Y6X9 1032 aaPredicted RBP7.53□□□□□ -1.2
SMG1-204ENST00000561940 A0A087WZ62 844 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 PIPSLA2A3N6 862 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 ADAMTS3O15072 1205 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 THAP12O43422 761 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 NDST3O95803 873 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 MC2RQ01718 297 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 ELF2Q15723 593 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 CYP2A13Q16696 494 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 GEN1Q17RS7 908 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 HECTD2Q5U5R9 776 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 Q6YL49 198 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 ANKRD42Q8N9B4 389 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 SUPT20HQ8NEM7 779 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 CAVIN3Q969G5 261 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 SMOQ99835 787 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 SIK2Q9H0K1 926 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 ZNF212Q9UDV6 495 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 KCNE5Q9UJ90 142 aa7.52□□□□□ -1.21
SMG1-204ENST00000561940 PLA2G6O60733 806 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 EGR2P11161 476 aaPredicted RBP7.51□□□□□ -1.21
SMG1-204ENST00000561940 PDIA3P30101 505 aaKnown RBP7.51□□□□□ -1.21
SMG1-204ENST00000561940 PLA2G5P39877 138 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 ZNF134P52741 427 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 SCAPQ12770 1279 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 ZRSR2Q15696 482 aaKnown RBP7.51□□□□□ -1.21
SMG1-204ENST00000561940 AMOTQ4VCS5 1084 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 TAF2Q6P1X5 1199 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 ZNF280BQ86YH2 543 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 SLC44A3Q8N4M1 653 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 FANCBQ8NB91 859 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 PSD4Q8NDX1 1056 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 BOD1Q96IK1 185 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 Q96MF0 132 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 AGAP2Q99490 1192 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 STK33Q9BYT3 514 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 UNKLQ9H9P5 680 aaKnown RBP7.51□□□□□ -1.21
SMG1-204ENST00000561940 CTTNBP2NLQ9P2B4 639 aa7.51□□□□□ -1.21
SMG1-204ENST00000561940 MAGED2Q9UNF1 606 aaPredicted RBP7.51□□□□□ -1.21
SMG1-204ENST00000561940 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 FAM234BA2RU67 622 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 H7C4K7 107 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 RAB27BO00194 218 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 MYL4P12829 197 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 TYRP1P17643 537 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 IL1R2P27930 398 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 VIPR2P41587 438 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 ALDH9A1P49189 494 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 PUM3Q15397 648 aaKnown RBP7.5□□□□□ -1.21
SMG1-204ENST00000561940 ZIK1Q3SY52 487 aaPredicted RBP7.5□□□□□ -1.21
SMG1-204ENST00000561940 PLA1AQ53H76 456 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 CATSPERGQ6ZRH7 1159 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 Q8NA96 180 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 MESP1Q9BRJ9 268 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 CASS4Q9NQ75 786 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 SLC39A10Q9ULF5 831 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 PAXBP1Q9Y5B6 917 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 PCDHGB3Q9Y5G1 929 aa7.5□□□□□ -1.21
SMG1-204ENST00000561940 CLCA1A8K7I4 914 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 A1BGP04217 495 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 PROZP22891 400 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 LILRA4P59901 499 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 PIGFQ07326 219 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 ZNF844Q08AG5 666 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 GALNT1Q10472 559 aaPredicted RBP7.49□□□□□ -1.21
SMG1-204ENST00000561940 CD300EQ496F6 205 aaPredicted RBP7.49□□□□□ -1.21
SMG1-204ENST00000561940 ABHD17BQ5VST6 288 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 ARMC6Q6NXE6 501 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 BEND5Q7L4P6 421 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 KCTD20Q7Z5Y7 419 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 NKAPQ8N5F7 415 aaKnown RBP7.49□□□□□ -1.21
SMG1-204ENST00000561940 VGLL2Q8N8G2 317 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 ZNF527Q8NB42 609 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 TMEM125Q96AQ2 219 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 EVI5LQ96CN4 794 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 PTCD3Q96EY7 689 aaKnown RBP7.49□□□□□ -1.21
SMG1-204ENST00000561940 GDF15Q99988 308 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 TMEM74BQ9NUR3 256 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 PACSIN3Q9UKS6 424 aa7.49□□□□□ -1.21
SMG1-204ENST00000561940 EPN1Q9Y6I3 576 aaPredicted RBP7.49□□□□□ -1.21
SMG1-204ENST00000561940 CCDC195A0A1B0GUA6 201 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 SUN1O94901 812 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 HKR1P10072 659 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 BTF3P20290 206 aaKnown RBP7.48□□□□□ -1.21
SMG1-204ENST00000561940 ACVR2AP27037 513 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 WNT3P56703 355 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 ICA1Q05084 483 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 FPGSQ05932 587 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 FOXI1Q12951 378 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 IQCB1Q15051 598 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 PCSK4Q6UW60 755 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 MYCT1Q8N699 235 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 GLIS1Q8NBF1 620 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 MYRIPQ8NFW9 859 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 POC1BQ8TC44 478 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 IPO4Q8TEX9 1081 aaKnown RBP7.48□□□□□ -1.21
SMG1-204ENST00000561940 MUL1Q969V5 352 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 MED15Q96RN5 788 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 HERPUD2Q9BSE4 406 aa7.48□□□□□ -1.21
SMG1-204ENST00000561940 TBCCD1Q9NVR7 557 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms