RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 CNNM1Q9NRU3 951 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 NOB1Q9ULX3 412 aaKnown RBP2.94□□□□□ -1.94
CHD9-204ENST00000561869 L1RE1Q9UN81 338 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 SHOC2Q9UQ13 582 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 EID1Q9Y6B2 187 aa2.94□□□□□ -1.94
CHD9-204ENST00000561869 FER1L4A9Z1Z3 1794 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 A0A1W2PPL8 197 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 A1L4Q6 167 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 TMEM233B4DJY2 109 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 TBX3O15119 743 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 TJP3O95049 919 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 ONECUT2O95948 504 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 PRKCGP05129 697 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 FESP07332 822 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 CELA2AP08217 269 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 KCNA3P22001 575 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 LRPAP1P30533 357 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 CYP2C18P33260 490 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 ALDH9A1P49189 494 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 SRSF4Q08170 494 aaKnown RBP2.93□□□□□ -1.94
CHD9-204ENST00000561869 E2F2Q14209 437 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 PROSER3Q2NL68 480 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 FAM153CQ494X1 144 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 AARS2Q5JTZ9 985 aaKnown RBP2.93□□□□□ -1.94
CHD9-204ENST00000561869 APOA5Q6Q788 366 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 ZNF783Q6ZMS7 281 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 WDR53Q7Z5U6 358 aaPredicted RBP2.93□□□□□ -1.94
CHD9-204ENST00000561869 TCEAL8Q8IYN2 117 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 ANKRD13AQ8IZ07 590 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 MAGEB6Q8N7X4 407 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 SEMA6DQ8NFY4 1073 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 OR6B3Q8NGW1 331 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 SOCS4Q8WXH5 440 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 TBC1D5Q92609 795 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 THAP7Q9BT49 309 aaPredicted RBP2.93□□□□□ -1.94
CHD9-204ENST00000561869 FSD1LQ9BXM9 530 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 DUSP22Q9NRW4 184 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 STK32BQ9NY57 414 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 PADI4Q9UM07 663 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 GABRQQ9UN88 632 aa2.93□□□□□ -1.94
CHD9-204ENST00000561869 CAPN8A6NHC0 703 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 LINC01548A6NM66 108 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 TISP43B9A030 160 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 TSPAN6O43657 245 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 JTBO76095 146 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 S100BP04271 92 aaPredicted RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 U2AF1L5P0DN76 240 aaPredicted RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 XRCC6P12956 609 aaKnown RBP eCLIP2.92□□□□□ -1.94
CHD9-204ENST00000561869 NDUFB7P17568 137 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 ADORA2AP29274 412 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 EEFSECP57772 596 aaKnown RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 CYP4F2P78329 520 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 SSBP2P81877 361 aaPredicted RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 U2AF1Q01081 240 aaKnown RBP eCLIP2.92□□□□□ -1.94
CHD9-204ENST00000561869 LY6KQ17RY6 165 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 PTCHD3Q3KNS1 767 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 LMBRD2Q68DH5 695 aaPredicted RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 CEP85Q6P2H3 762 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 ZDHHC24Q6UX98 284 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 ZNF782Q6ZMW2 699 aaPredicted RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 Q6ZWC4 215 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 MICU3Q86XE3 530 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 ABRAQ8N0Z2 381 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 OR56A3Q8NH54 315 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 RP9Q8TA86 221 aaKnown RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 DDB2Q92466 427 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 R3HDM4Q96D70 268 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 MACROD1Q9BQ69 325 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 MS4A7Q9GZW8 240 aaPredicted RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 GLOD4Q9HC38 313 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 C1orf112Q9NSG2 853 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 FLRT1Q9NZU1 646 aa2.92□□□□□ -1.94
CHD9-204ENST00000561869 DDX20Q9UHI6 824 aaKnown RBP2.92□□□□□ -1.94
CHD9-204ENST00000561869 TRIM43BA6NCK2 446 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 DNAJC9-AS1A6NH13 148 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 FAM227AF5H4B4 570 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 MYO1CO00159 1063 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 ADAMTS3O15072 1205 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 PPM1GO15355 546 aaPredicted RBP2.91□□□□□ -1.94
CHD9-204ENST00000561869 FRS3O43559 492 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 VNN1O95497 513 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 ENGP17813 658 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 CTGFP29279 349 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 SLC7A1P30825 629 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 PDE6CP51160 858 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 KRTAP10-9P60411 292 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 SLC13A2Q13183 592 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 GALEQ14376 348 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 MLC1Q15049 377 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 PPP2R5AQ15172 486 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 LLGL1Q15334 1064 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 CNN3Q15417 329 aaKnown RBP2.91□□□□□ -1.94
CHD9-204ENST00000561869 CYP1B1Q16678 543 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 MGAT5BQ3V5L5 792 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 MINDY4Q4G0A6 757 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 PLA1AQ53H76 456 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 PCID2Q5JVF3 399 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 DEPDC1Q5TB30 811 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 DCAF12L1Q5VU92 463 aa2.91□□□□□ -1.94
CHD9-204ENST00000561869 PAPD7Q5XG87 772 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms