RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 YWHAEP62258 255 aaKnown RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 RBM10P98175 930 aaKnown RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 C2orf54Q08AI8 447 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 MAMLD1Q13495 774 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 ITGA7Q13683 1181 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 LPIN1Q14693 890 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 PTGISQ16647 500 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 C4orf46Q504U0 113 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM164Q5U3C3 297 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 PPP1R2P3Q6NXS1 205 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 VASH1Q7L8A9 365 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 PEX26Q7Z412 305 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 PASD1Q8IV76 773 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 USP38Q8NB14 1042 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 BEST2Q8NFU1 509 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF564Q8TBZ8 553 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 KRT35Q92764 455 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 TRIM11Q96F44 468 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 BTBD6Q96KE9 485 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 MRPL45Q9BRJ2 306 aaKnown RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF518BQ9C0D4 1074 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 RBM12Q9NTZ6 932 aaKnown RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 TRMT13Q9NUP7 481 aaKnown RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 RNF19AQ9NV58 838 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 GDAP2Q9NXN4 497 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 KLK14Q9P0G3 267 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 CTTNBP2NLQ9P2B4 639 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 AMFRQ9UKV5 643 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 BARX2Q9UMQ3 279 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 UBQLN1Q9UMX0 589 aaKnown RBP6.93□□□□□ -1.3
CAPN3-210ENST00000561817 PHF24Q9UPV7 400 aa6.93□□□□□ -1.3
CAPN3-210ENST00000561817 TARSL2A2RTX5 802 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM191CA6NGB0 347 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 MIF4GDA9UHW6 222 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 KCNK3O14649 394 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 INPPL1O15357 1258 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CAND2O75155 1236 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 RPS6KA5O75582 802 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 MICAL2O94851 1124 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 PROSCO94903 275 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CD4P01730 458 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CTSHP09668 335 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 FGFR1P11362 822 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 VDRP11473 427 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 BMP2P12643 396 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 FSHRP23945 695 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CTNNA1P35221 906 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 GPD2P43304 727 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 NSFP46459 744 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 GABRB2P47870 512 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CDK7P50613 346 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 AFF1P51825 1210 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 NDST1P52848 882 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 YARSP54577 528 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF252P-AS1Q0IIN9 211 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 ORC1Q13415 861 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 MBTPS1Q14703 1052 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CNGA2Q16280 664 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 SOWAHAQ2M3V2 549 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CFAP221Q4G0U5 840 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 PTPN20Q4JDL3 420 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 ZNF394Q53GI3 561 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 C2CD6Q53TS8 623 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 FAM47CQ5HY64 1035 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 GLRA4Q5JXX5 417 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 WDR93Q6P2C0 686 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 LCLAT1Q6UWP7 414 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 AGMOQ6ZNB7 445 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 MMS22LQ6ZRQ5 1243 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 RNF180Q86T96 592 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 RSPH3Q86UC2 560 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 ZDHHC14Q8IZN3 488 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 TTC39CQ8N584 583 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM35BQ8NCS4 154 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 C1orf131Q8NDD1 294 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 HDAC7Q8WUI4 952 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 KBTBD7Q8WVZ9 684 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 TMEM176AQ96HP8 235 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 C11orf70Q9BRQ4 267 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 APOL6Q9BWW8 343 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 CARD9Q9H257 536 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 FAM105AQ9NUU6 356 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 MIOSQ9NXC5 875 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 FAM53CQ9NYF3 392 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 ADAM22Q9P0K1 906 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 TJP2Q9UDY2 1190 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 PADI3Q9ULW8 664 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 PCDHA3Q9Y5H8 950 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 SQORQ9Y6N5 450 aa6.92□□□□□ -1.3
CAPN3-210ENST00000561817 KIAA0100Q14667 2235 aaKnown RBP6.92□□□□□ -1.3
CAPN3-210ENST00000561817 A0A1W2PQ45 241 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-210ENST00000561817 A0A1W2PQY0 241 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 GPR182O15218 404 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CEP104O60308 925 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 GJB6O95452 261 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 CALB1P05937 261 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 FAM163BP0C2L3 166 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 RHOXF2BP0C7M4 288 aa6.91□□□□□ -1.3
CAPN3-210ENST00000561817 ITGA4P13612 1032 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms