RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ZC3H3Q8IXZ2 948 aaKnown RBP25.39■■□□□ 1.66
CDR2-202ENST00000561630 TAS1R2Q8TE23 839 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 MRPS31Q92665 395 aaKnown RBP25.39■■□□□ 1.66
CDR2-202ENST00000561630 TSG101Q99816 390 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 ELOVL4Q9GZR5 314 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 TMEM8AQ9HCN3 771 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 DLGAP2Q9P1A6 1054 aa25.39■■□□□ 1.66
CDR2-202ENST00000561630 TRIM66O15016 1216 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 CHADO15335 359 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 TADA3O75528 432 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 DCNP07585 359 aaKnown RBP25.38■■□□□ 1.65
CDR2-202ENST00000561630 ASPAP45381 313 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 PMS1P54277 932 aaKnown RBP25.38■■□□□ 1.65
CDR2-202ENST00000561630 FKBP3Q00688 224 aaKnown RBP25.38■■□□□ 1.65
CDR2-202ENST00000561630 LRRC63Q05C16 580 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 ANKRD40Q6AI12 368 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 SPOPLQ6IQ16 392 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 MON1AQ86VX9 555 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 YAF2Q8IY57 180 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 MAB21L3Q8N8X9 362 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 TNIP3Q96KP6 325 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 C8orf48Q96LL4 319 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 B3GNT5Q9BYG0 378 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 OSBPL6Q9BZF3 934 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 MAN1B1Q9UKM7 699 aa25.38■■□□□ 1.65
CDR2-202ENST00000561630 SHISA7A6NL88 538 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 F8VP50 259 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 H0Y858 1186 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 SLC16A3O15427 465 aaKnown RBP25.37■■□□□ 1.65
CDR2-202ENST00000561630 CD72P21854 359 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 ANXA13P27216 316 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 AVPR1AP37288 418 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 TXNDC8Q6A555 127 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 DENND5BQ6ZUT9 1274 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 CELF5Q8N6W0 485 aaKnown RBP25.37■■□□□ 1.65
CDR2-202ENST00000561630 IMPG2Q9BZV3 1241 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 ZNF518BQ9C0D4 1074 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 LTB4R2Q9NPC1 389 aa25.37■■□□□ 1.65
CDR2-202ENST00000561630 PSMA7O14818 248 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 STIM1Q13586 685 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 UBXN2BQ14CS0 331 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 KRT39Q6A163 491 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 ISM2Q6H9L7 571 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 ZNF852Q6ZMS4 543 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 DHTKD1Q96HY7 919 aaPredicted RBP25.36■■□□□ 1.65
CDR2-202ENST00000561630 NELL2Q99435 816 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 BCO2Q9BYV7 579 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 SMG9Q9H0W8 520 aaKnown RBP25.36■■□□□ 1.65
CDR2-202ENST00000561630 MMRN2Q9H8L6 949 aa25.36■■□□□ 1.65
CDR2-202ENST00000561630 APOBEC3GQ9HC16 384 aaKnown RBP25.36■■□□□ 1.65
CDR2-202ENST00000561630 MTF2Q9Y483 593 aaPredicted RBP25.36■■□□□ 1.65
CDR2-202ENST00000561630 FAM170BA6NMN3 283 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 STX10O60499 249 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 LRRN2O75325 713 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 GLULP15104 373 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 CCNE1P24864 410 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
CDR2-202ENST00000561630 PPP1R2P41236 205 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 CACNA2D1P54289 1103 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 NOP14P78316 857 aaKnown RBP25.35■■□□□ 1.65
CDR2-202ENST00000561630 ARHGAP29Q52LW3 1261 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 UNC93AQ86WB7 457 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 CRYBG2Q8N1P7 616 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 BPIFB1Q8TDL5 484 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 USP13Q92995 863 aaPredicted RBP25.35■■□□□ 1.65
CDR2-202ENST00000561630 TTLL2Q9BWV7 592 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.35■■□□□ 1.653e-10■■■■■ 130.4
CDR2-202ENST00000561630 TMEM30AQ9NV96 361 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 EHD2Q9NZN4 543 aa25.35■■□□□ 1.65
CDR2-202ENST00000561630 COL4A3Q01955 1670 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 TRIM49BA6NDI0 452 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 CLDN5O00501 218 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 MAN2B1O00754 1011 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 CD44P16070 742 aaKnown RBP25.34■■□□□ 1.65
CDR2-202ENST00000561630 BMP6P22004 513 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 NDST1P52848 882 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 MLLT6P55198 1093 aaPredicted RBP25.34■■□□□ 1.65
CDR2-202ENST00000561630 USP46P62068 366 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 UBE2HP62256 183 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 ACOT1Q86TX2 421 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 CCDC150Q8NCX0 1101 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 ATOH1Q92858 354 aaPredicted RBP25.34■■□□□ 1.65
CDR2-202ENST00000561630 NIF3L1Q9GZT8 377 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 CYP3A43Q9HB55 503 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 TDP1Q9NUW8 608 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 HMGXB4Q9UGU5 601 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 CCL26Q9Y258 94 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 MRPS17Q9Y2R5 130 aaKnown RBP25.34■■□□□ 1.65
CDR2-202ENST00000561630 PIAS3Q9Y6X2 628 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 ATP8B3O60423 1300 aa25.34■■□□□ 1.65
CDR2-202ENST00000561630 TARSP26639 723 aaKnown RBP25.33■■□□□ 1.65
CDR2-202ENST00000561630 HOXD11P31277 338 aaPredicted RBP25.33■■□□□ 1.65
CDR2-202ENST00000561630 MXI1P50539 228 aa25.33■■□□□ 1.65
CDR2-202ENST00000561630 PLCB2Q00722 1185 aa25.33■■□□□ 1.65
CDR2-202ENST00000561630 INCA1Q0VD86 236 aa25.33■■□□□ 1.65
CDR2-202ENST00000561630 MORC3Q14149 939 aa25.33■■□□□ 1.65
CDR2-202ENST00000561630 ZNF268Q14587 947 aaPredicted RBP25.33■■□□□ 1.65
CDR2-202ENST00000561630 PAQR9Q6ZVX9 377 aa25.33■■□□□ 1.65
CDR2-202ENST00000561630 CSGALNACT1Q8TDX6 532 aa25.33■■□□□ 1.65
CDR2-202ENST00000561630 KIF9Q9HAQ2 790 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms