RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 TCAF1Q9Y4C2 921 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 FANCIQ9NVI1 1328 aa4.45□□□□□ -1.7
HERC1-211ENST00000560983 ZNFX1Q9P2E3 1918 aaKnown RBP4.44□□□□□ -1.7
HERC1-211ENST00000560983 HIDE1A8MVS5 230 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 FAM47E-STBD1D6RA91 191 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 FOXS1O43638 330 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 TBC1D4O60343 1298 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 ARIH2O95376 493 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 GDF5P43026 501 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 DBPQ10586 325 aaPredicted RBP4.44□□□□□ -1.7
HERC1-211ENST00000560983 TOP3AQ13472 1001 aaPredicted RBP4.44□□□□□ -1.7
HERC1-211ENST00000560983 MUM1L1Q5H9M0 696 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 SPDYAQ5MJ70 313 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 GORABQ5T7V8 394 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 CCDC62Q6P9F0 684 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 SERINC5Q86VE9 423 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 CERS3Q8IU89 383 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 HOMEZQ8IX15 550 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 C7orf31Q8N865 590 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 ATRIPQ8WXE1 791 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 SECISBP2LQ93073 1101 aaKnown RBP4.44□□□□□ -1.7
HERC1-211ENST00000560983 CCDC17Q96LX7 622 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 VPS11Q9H270 941 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 DEF6Q9H4E7 631 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 TBC1D17Q9HA65 648 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 RNF146Q9NTX7 359 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 ANKFY1Q9P2R3 1169 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 SWAP70Q9UH65 585 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 FBXO4Q9UKT5 387 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 SRPK3Q9UPE1 567 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 PCDHGA2Q9Y5H1 932 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 ITPR1Q14643 2758 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 MYH13Q9UKX3 1938 aa4.44□□□□□ -1.7
HERC1-211ENST00000560983 BLACEA4D250 179 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 TMEM8BA6NDV4 472 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 SUV39H1O43463 412 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 CUTAO60888 179 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 FZD7O75084 574 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 FBXO21O94952 628 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 TOP3BO95985 862 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 TXNP10599 105 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 NCLP19338 710 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 CASTP20810 708 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 EDNRBP24530 442 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 DNAJA1P31689 397 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 GLRBP48167 497 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 ALDH5A1P51649 535 aaPredicted RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 UBE3AQ05086 875 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 ITIH3Q06033 890 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 ARHGAP1Q07960 439 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 IFRD2Q12894 506 aaPredicted RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 DUSP8Q13202 625 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 BAATQ14032 418 aaPredicted RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 USP10Q14694 798 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 CCDC6Q16204 474 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 KIAA0753Q2KHM9 967 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 DPH6Q7L8W6 267 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 RTN4RL1Q86UN2 441 aaPredicted RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 PALM2Q8IXS6 379 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 C12orf76Q8N812 135 aaPredicted RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 TDRD5Q8NAT2 981 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 APBB2Q92870 758 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 GNRHR2Q96P88 292 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 LMF1Q96S06 567 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 KCNJ15Q99712 375 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 ALG1Q9BT22 464 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 PCED1AQ9H1Q7 454 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 JADE2Q9NQC1 790 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 RXFP3Q9NSD7 469 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 SEMA4GQ9NTN9 838 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 ZSCAN32Q9NX65 697 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 FEM1BQ9UK73 627 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 R3HCC1Q9Y3T6 440 aaKnown RBP4.43□□□□□ -1.7
HERC1-211ENST00000560983 SCN10AQ9Y5Y9 1956 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 RAD50Q92878 1312 aa4.43□□□□□ -1.7
HERC1-211ENST00000560983 CYP2D7A0A087X1C5 515 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 LOC102724159A0A0B4J2E5 919 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 FSD2A1L4K1 749 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 KCNK5O95279 499 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 F2P00734 622 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 CHRNA1P02708 482 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 ZNF888P0CJ79 500 aaPredicted RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 ALAS1P13196 640 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 HOXC8P31273 242 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 MTHFRP42898 656 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 LIMK1P53667 647 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 SNAP25P60880 206 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 CSTF1Q05048 431 aaKnown RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 NFYCQ13952 458 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 PPP2R5BQ15173 497 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 PWP2Q15269 919 aaKnown RBP4.42□□□□□ -1.7
HERC1-211ENST00000560983 CSRP2Q16527 193 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 LY6KQ17RY6 165 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 TKFCQ3LXA3 575 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 MIIPQ5JXC2 388 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 ATAT1Q5SQI0 421 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 C12orf60Q5U649 245 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 CES5AQ6NT32 575 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 TSSK4Q6SA08 328 aa4.42□□□□□ -1.7
HERC1-211ENST00000560983 MAMDC2Q7Z304 686 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms