RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 NLRP12P59046 1061 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 UBE2HP62256 183 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 TSPY1Q01534 308 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 POU5F1Q01860 360 aaKnown RBP11.51□□□□□ -0.57
TPM1-227ENST00000560970 BFSP1Q12934 665 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 PSMD2Q13200 908 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 LMBRD2Q68DH5 695 aaPredicted RBP11.51□□□□□ -0.57
TPM1-227ENST00000560970 CLEC17AQ6ZS10 378 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 NT5DC4Q86YG4 428 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 C12orf56Q8IXR9 622 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 CMTM8Q8IZV2 173 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 GAB3Q8WWW8 586 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 DDX1Q92499 740 aaKnown RBP11.51□□□□□ -0.57
TPM1-227ENST00000560970 TIGD1Q96MW7 591 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 GZF1Q9H116 711 aaPredicted RBP11.51□□□□□ -0.57
TPM1-227ENST00000560970 PDE11AQ9HCR9 933 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 DPP3Q9NY33 737 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 MAPK8IP1Q9UQF2 711 aa11.51□□□□□ -0.57
TPM1-227ENST00000560970 ZFHX4Q86UP3 3567 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 CCDC163A0A0D9SF12 145 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 RPP40O75818 363 aaKnown RBP11.5□□□□□ -0.57
TPM1-227ENST00000560970 EPN2O95208 641 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 LDHAP00338 332 aaKnown RBP11.5□□□□□ -0.57
TPM1-227ENST00000560970 LIMK1P53667 647 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 GRSF1Q12849 480 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM1-227ENST00000560970 AASDHQ4L235 1098 aaPredicted RBP11.5□□□□□ -0.57
TPM1-227ENST00000560970 TMEM196Q5HYL7 178 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 WSCD1Q658N2 575 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 PKN3Q6P5Z2 889 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 HS2ST1Q7LGA3 356 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 TMEM150AQ86TG1 271 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 DCP1BQ8IZD4 617 aaKnown RBP11.5□□□□□ -0.57
TPM1-227ENST00000560970 C12orf50Q8NA57 414 aaPredicted RBP11.5□□□□□ -0.57
TPM1-227ENST00000560970 PLEKHO2Q8TD55 490 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 GIPC2Q8TF65 315 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
TPM1-227ENST00000560970 CHFRQ96EP1 664 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 FAM83CQ9BQN1 747 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 SLC46A2Q9BY10 475 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 MTMR12Q9C0I1 747 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 HPS4Q9NQG7 708 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 CCL26Q9Y258 94 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 PCDHB5Q9Y5E4 795 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 PCDHA5Q9Y5H7 936 aa11.5□□□□□ -0.57
TPM1-227ENST00000560970 SOBPA7XYQ1 873 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 KPNA7A9QM74 516 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 KIAA0391O15091 583 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 PRPF40AO75400 957 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 TADA3O75528 432 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 AKAP3O75969 853 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 CSH1P0DML2 217 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 CSH2P0DML3 217 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 CCDC192P0DO97 292 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 HMGA1P17096 107 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 POLR2BP30876 1174 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 CDR1P51861 262 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 SNRPFP62306 86 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 CYP24A1Q07973 514 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 USP4Q13107 963 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 RUNX3Q13761 415 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 ZNF268Q14587 947 aaPredicted RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 SNRNP35Q16560 246 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 NFE2Q16621 373 aaPredicted RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 ZCWPW2Q504Y3 356 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 TRIM68Q6AZZ1 485 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 FSTL4Q6MZW2 842 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 CC2D1AQ6P1N0 951 aaPredicted RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 GUF1Q8N442 669 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 CPA6Q8N4T0 437 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 MAB21L3Q8N8X9 362 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 C1orf127Q8N9H9 656 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 XXYLT1Q8NBI6 393 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 RDH13Q8NBN7 331 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 STKLD1Q8NE28 680 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 OR5B17Q8NGF7 314 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 CXorf38Q8TB03 319 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 USP13Q92995 863 aaPredicted RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 CCDC47Q96A33 483 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 TRMT2BQ96GJ1 504 aaKnown RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 LOXL4Q96JB6 756 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 EBF3Q9H4W6 596 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 ABCB6Q9NP58 842 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 TDP1Q9NUW8 608 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 DMAC2Q9NW81 257 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 UXTQ9UBK9 157 aaPredicted RBP11.49□□□□□ -0.57
TPM1-227ENST00000560970 MAN1B1Q9UKM7 699 aa11.49□□□□□ -0.57
TPM1-227ENST00000560970 ZNF233A6NK53 670 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 TULP1O00294 542 aaPredicted RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 TRDMT1O14717 391 aaKnown RBP11.48□□□□□ -0.57
TPM1-227ENST00000560970 GDF9O60383 454 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 ATG13O75143 517 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 RNF40O75150 1001 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 NOL4O94818 638 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 F11P03951 625 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 NR3C1P04150 777 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 ITGB3P05106 788 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 PRCPP42785 496 aa11.48□□□□□ -0.57
TPM1-227ENST00000560970 CASP4P49662 377 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms