RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SNAI1O95863 264 aaPredicted RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 CPP00450 1065 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 SHBGP04278 402 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 ITGB3P05106 788 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 MMP3P08254 477 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 KRT19P08727 400 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 FAM163BP0C2L3 166 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 YBX3P16989 372 aaKnown RBP eCLIP10.21□□□□□ -0.777e-8■□□□□ 8.2
RTF1-206ENST00000560447 ATF7P17544 494 aaPredicted RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 SSR1P43307 286 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 SLC25A11Q02978 314 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 SNX1Q13596 522 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 AUHQ13825 339 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 SCARA5Q6ZMJ2 495 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 ILDR2Q71H61 639 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 ARCQ7LC44 396 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 GSTA5Q7RTV2 222 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 ANKS1BQ7Z6G8 1248 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 PLEKHH3Q7Z736 793 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 CNPY4Q8N129 248 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 CEP120Q8N960 986 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 CMASQ8NFW8 434 aaPredicted RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 NLRP7Q8WX94 980 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 MAML3Q96JK9 1138 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 HERPUD2Q9BSE4 406 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 TINF2Q9BSI4 451 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 CNPY3Q9BT09 278 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 NT5C1AQ9BXI3 368 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 GCOM2Q9BZD3 368 aaPredicted RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 NSRP1Q9H0G5 558 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 RSAD1Q9HA92 442 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 PRDM16Q9HAZ2 1276 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 UBN1Q9NPG3 1134 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 DPP3Q9NY33 737 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 SENP1Q9P0U3 644 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 NXF1Q9UBU9 619 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 TPX2Q9ULW0 747 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 POLIQ9UNA4 740 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 R3HDM2Q9Y2K5 976 aaKnown RBP10.21□□□□□ -0.77
RTF1-206ENST00000560447 FAM169AQ9Y6X4 670 aa10.21□□□□□ -0.77
RTF1-206ENST00000560447 NRCAMQ92823 1304 aa10.21□□□□□ -0.78
RTF1-206ENST00000560447 LRRD1A4D1F6 860 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 F8VP50 259 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 APOC4-APOC2K7ER74 178 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 MEFVO15553 781 aaPredicted RBP10.2□□□□□ -0.78
RTF1-206ENST00000560447 LRCH4O75427 683 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 TOMM70O94826 608 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 MICAL2O94851 1124 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 ENDOD1O94919 500 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 APOC2P02655 101 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 IQCF3P0C7M6 154 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 CYP2C8P10632 490 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 FGFR4P22455 802 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 RFC1P35251 1148 aaPredicted RBP10.2□□□□□ -0.78
RTF1-206ENST00000560447 GPD2P43304 727 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 ZNF143P52747 638 aaPredicted RBP10.2□□□□□ -0.78
RTF1-206ENST00000560447 SLC18A1P54219 525 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 YARSP54577 528 aaKnown RBP10.2□□□□□ -0.78
RTF1-206ENST00000560447 OGDHQ02218 1023 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 ACVR2BQ13705 512 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 TFDP2Q14188 446 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 CCDC142Q17RM4 750 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 ZNF394Q53GI3 561 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 C2CD6Q53TS8 623 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 FAM47CQ5HY64 1035 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 ZFYVE27Q5T4F4 411 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 LLGL2Q6P1M3 1020 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 SLC27A1Q6PCB7 646 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 FOXR1Q6PIV2 292 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 C4orf22Q6V702 233 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 GPR142Q7Z601 462 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 DPP9Q86TI2 863 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 CCDC25Q86WR0 208 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 BEST2Q8NFU1 509 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 OR6J1Q8NGC5 347 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 TEKT4Q8WW24 435 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 ATG4AQ8WYN0 398 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 RAPGEF5Q92565 580 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 CHMP6Q96FZ7 201 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 TBCBQ99426 244 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 HEMGNQ9BXL5 484 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 FRMD8Q9BZ67 464 aaPredicted RBP10.2□□□□□ -0.78
RTF1-206ENST00000560447 ELOVL4Q9GZR5 314 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 SDCBP2Q9H190 292 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 RASSF4Q9H2L5 321 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 SYNCQ9H7C4 482 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 NINJ2Q9NZG7 142 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 AGAP1Q9UPQ3 857 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 ZNF148Q9UQR1 794 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 Q9Y3F1 56 aa10.2□□□□□ -0.78
RTF1-206ENST00000560447 TRIP11Q15643 1979 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 TLDC2A0PJX2 215 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 MBLAC1A4D2B0 266 aaPredicted RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 CFAP69A5D8W1 941 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 A6NJR5 290 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 C3orf70A6NLC5 250 aaPredicted RBP10.19□□□□□ -0.78
RTF1-206ENST00000560447 M0QYV0 167 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ALOX15BO15296 676 aa10.19□□□□□ -0.78
RTF1-206ENST00000560447 ZNF189O75820 626 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms