RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 USP37Q86T82 979 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 ADHFE1Q8IWW8 467 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.68□□□□□ -1.82
SPG11-222ENST00000560435 WDR66Q8TBY9 1149 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 ZNF398Q8TD17 642 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 GLG1Q92896 1179 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 R3HDM4Q96D70 268 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 PUS7Q96PZ0 661 aaKnown RBP3.68□□□□□ -1.82
SPG11-222ENST00000560435 TRMOQ9BU70 441 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 EFHD1Q9BUP0 239 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 SLAMF7Q9NQ25 335 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 GABRQQ9UN88 632 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 SQORQ9Y6N5 450 aa3.68□□□□□ -1.82
SPG11-222ENST00000560435 ZMYM2Q9UBW7 1377 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 TCRBV5S1A1TA0A578 114 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 A1L4Q6 167 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 TMEM232C9JQI7 657 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 FZD9O00144 591 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 GNAI2P04899 355 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 DLDP09622 509 aaKnown RBP3.67□□□□□ -1.82
SPG11-222ENST00000560435 PSG1P11464 419 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 PRDX5P30044 214 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 ZNF628Q5EBL2 1059 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 RNF219Q5W0B1 726 aaPredicted RBP3.67□□□□□ -1.82
SPG11-222ENST00000560435 LVRNQ6Q4G3 990 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 DEF8Q6ZN54 512 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 FAM90A1Q86YD7 464 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 XAGE5Q8WWM1 108 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 LENG8Q96PV6 779 aaPredicted RBP3.67□□□□□ -1.82
SPG11-222ENST00000560435 SIGLEC11Q96RL6 698 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 PTDSS2Q9BVG9 487 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 C1orf43Q9BWL3 253 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 PI4KBQ9UBF8 816 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 HESX1Q9UBX0 185 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 CCNL1Q9UK58 526 aaPredicted RBP3.67□□□□□ -1.82
SPG11-222ENST00000560435 ZDHHC8Q9ULC8 765 aa3.67□□□□□ -1.82
SPG11-222ENST00000560435 ERC2O15083 957 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 ATXN1LP0C7T5 689 aaKnown RBP3.66□□□□□ -1.82
SPG11-222ENST00000560435 PHKA1P46020 1223 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 FAM187BQ17R55 369 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 L1TD1Q5T7N2 865 aaKnown RBP3.66□□□□□ -1.82
SPG11-222ENST00000560435 ARHGAP40Q5TG30 622 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 LAYNQ6UX15 382 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 PIM3Q86V86 326 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 FAM46DQ8NEK8 389 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 COA7Q96BR5 231 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 SLC46A1Q96NT5 459 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 FYTTD1Q96QD9 318 aaKnown RBP3.66□□□□□ -1.82
SPG11-222ENST00000560435 CIPCQ9C0C6 399 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 ICKQ9UPZ9 632 aa3.66□□□□□ -1.82
SPG11-222ENST00000560435 B4DGG1 531 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 DCLK1O15075 740 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 CNOT3O75175 753 aaKnown RBP3.65□□□□□ -1.83
SPG11-222ENST00000560435 ARIH2O95376 493 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 T-ENOLP0DO92 83 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 PIM1P11309 404 aaPredicted RBP3.65□□□□□ -1.83
SPG11-222ENST00000560435 THBS4P35443 961 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 ME1P48163 572 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 PXNP49023 591 aaPredicted RBP3.65□□□□□ -1.83
SPG11-222ENST00000560435 ALDH5A1P51649 535 aaPredicted RBP3.65□□□□□ -1.83
SPG11-222ENST00000560435 RHDQ02161 417 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 DSC2Q02487 901 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 LONRF3Q496Y0 759 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 SLC15A3Q8IY34 581 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 ADAMTS18Q8TE60 1221 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 SOCS4Q8WXH5 440 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 TTYH3Q9C0H2 523 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 FAM234AQ9H0X4 552 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 TXLNGQ9NUQ3 528 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 MDFICQ9P1T7 246 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 HEY2Q9UBP5 337 aa3.65□□□□□ -1.83
SPG11-222ENST00000560435 BTBD19C9JJ37 291 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 TLR2O60603 784 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 PRKCBP05771 671 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 FPR3P25089 353 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 KIF23Q02241 960 aaPredicted RBP3.64□□□□□ -1.83
SPG11-222ENST00000560435 ID2Q02363 134 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 ZNF91Q05481 1191 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 ACAP2Q15057 778 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 INAVAQ3KP66 663 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 RNASE12Q5GAN4 147 aaKnown RBP3.64□□□□□ -1.83
SPG11-222ENST00000560435 RGS7BPQ6MZT1 257 aaPredicted RBP3.64□□□□□ -1.83
SPG11-222ENST00000560435 PGM2L1Q6PCE3 622 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 ARFGAP1Q8N6T3 406 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 C3orf20Q8ND61 904 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 ZNF548Q8NEK5 533 aaPredicted RBP3.64□□□□□ -1.83
SPG11-222ENST00000560435 C1orf162Q8NEQ5 155 aaPredicted RBP3.64□□□□□ -1.83
SPG11-222ENST00000560435 OSR1Q8TAX0 266 aaPredicted RBP3.64□□□□□ -1.83
SPG11-222ENST00000560435 WDCPQ9H6R7 721 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.64□□□□□ -1.83
SPG11-222ENST00000560435 MKS1Q9NXB0 559 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 TFCP2L1Q9NZI6 479 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 POLHQ9Y253 713 aa3.64□□□□□ -1.83
SPG11-222ENST00000560435 LRRC14BA6NHZ5 514 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 TULP3O75386 442 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 RNF8O76064 485 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 TGFB3P10600 412 aa3.63□□□□□ -1.83
SPG11-222ENST00000560435 CYP19A1P11511 503 aaPredicted RBP3.63□□□□□ -1.83
SPG11-222ENST00000560435 CDKN2AP42771 156 aaKnown RBP3.63□□□□□ -1.83
SPG11-222ENST00000560435 LILRA4P59901 499 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms