RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 PARM1Q6UWI2 310 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 UBALD2Q8IYN6 164 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 SLC44A3Q8N4M1 653 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 C12orf29Q8N999 325 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 RSAD2Q8WXG1 361 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 FGF14Q92915 247 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 TRMT2BQ96GJ1 504 aaKnown RBP14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 TWNKQ96RR1 684 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 ARID3AQ99856 593 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 MED10Q9BTT4 135 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 C1QTNF1Q9BXJ1 281 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 ZNF518BQ9C0D4 1074 aa14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 MAGED2Q9UNF1 606 aaPredicted RBP14.53□□□□□ -0.08
CHRNB4-204ENST00000559849 SLC38A8A6NNN8 435 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 F8VP50 259 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 NRG2O14511 850 aaPredicted RBP14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 NOL4O94818 638 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 YWHAEP62258 255 aaKnown RBP14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 TEAD2Q15562 447 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 KLHL40Q2TBA0 621 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 POTEHQ6S545 545 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 PAQR9Q6ZVX9 377 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 FUKQ8N0W3 1084 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 CYFIP2Q96F07 1278 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 GCNAQ96QF7 691 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 SLITRK6Q9H5Y7 841 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 IL21Q9HBE4 155 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 SAMSN1Q9NSI8 373 aaKnown RBP14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 EHD2Q9NZN4 543 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 NFE2L3Q9Y4A8 694 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 NUMBLQ9Y6R0 609 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 GREB1Q4ZG55 1949 aa14.52□□□□□ -0.09
CHRNB4-204ENST00000559849 F11P03951 625 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 ZNF394Q53GI3 561 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 ARHGAP15Q53QZ3 475 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 DENND5BQ6ZUT9 1274 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 FAM35AQ86V20 835 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 PPM1KQ8N3J5 372 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 STKLD1Q8NE28 680 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 SLC2A14Q8TDB8 520 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 SMARCD1Q96GM5 515 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 ZMYM5Q9UJ78 669 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 TECTAO75443 2155 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 DENND4CQ5VZ89 1909 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 CCDC130P13994 396 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 MAN2A1Q16706 1144 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 FAM78AQ5JUQ0 283 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 SMARCD2Q92925 531 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 TMEM176AQ96HP8 235 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 HEXIM2Q96MH2 286 aaKnown RBP14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 ZSWIM3Q96MP5 696 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 ASB16Q96NS5 453 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 KCNK16Q96T55 309 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 HNRNPABQ99729 332 aaKnown RBP14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 ZFP14Q9HCL3 533 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 FAM49BQ9NUQ9 324 aa14.51□□□□□ -0.09
CHRNB4-204ENST00000559849 ZNF638Q14966 1978 aaKnown RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 GTPBP10A4D1E9 387 aaKnown RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 AP1G2O75843 785 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 LETM1O95202 739 aaPredicted RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 EEF1GP26641 437 aaKnown RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 CACNA2D1P54289 1103 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 RAD23BP54727 409 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 GCNT1Q02742 428 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 SIGLEC14Q08ET2 396 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 HSP90AA4PQ58FG1 418 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 GBP6Q6ZN66 633 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TRIM67Q6ZTA4 783 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TMEM150AQ86TG1 271 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 SLC4A11Q8NBS3 891 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 ZSCAN18Q8TBC5 510 aaPredicted RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TUBGCP2Q9BSJ2 902 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 RPP25Q9BUL9 199 aaKnown RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 DMAP1Q9NPF5 467 aaPredicted RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TMEM30AQ9NV96 361 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 SOBPA7XYQ1 873 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 KCNJ18B7U540 433 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 GPR37L1O60883 481 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 ECI2O75521 394 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TYRO3Q06418 890 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 KCNJ12Q14500 433 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TCP11X2Q5H9J9 407 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 GPR158Q5T848 1215 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 C11orf57Q6ZUT1 292 aaPredicted RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 MRPS31Q92665 395 aaKnown RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 ELSPBP1Q96BH3 223 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 CRACR2AQ9BSW2 395 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 INTS2Q9H0H0 1204 aaKnown RBP14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 NDST4Q9H3R1 872 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TASP1Q9H6P5 420 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 TRPV4Q9HBA0 871 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 CSNK1G1Q9HCP0 422 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 KRT82Q9NSB4 513 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 GCNT4Q9P109 453 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 DUSP12Q9UNI6 340 aa14.5□□□□□ -0.09
CHRNB4-204ENST00000559849 FAM200BP0CF97 657 aa14.49□□□□□ -0.09
CHRNB4-204ENST00000559849 DDX6P26196 483 aaKnown RBP eCLIP14.49□□□□□ -0.09
CHRNB4-204ENST00000559849 ADORA2BP29275 332 aa14.49□□□□□ -0.09
CHRNB4-204ENST00000559849 CYP4F8P98187 520 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms