RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CHFRQ96EP1 664 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 BORCS6Q96GS4 357 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 ZNF512Q96ME7 567 aaPredicted RBP6.3□□□□□ -1.4
USP3-215ENST00000559771 PGLYRP2Q96PD5 576 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 REEP2Q9BRK0 252 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 TIPINQ9BVW5 301 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 BRD9Q9H8M2 597 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 LMAN1LQ9HAT1 526 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 PLEKHA5Q9HAU0 1116 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 BLOC1S4Q9NUP1 217 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 CPSF3Q9UKF6 684 aaKnown RBP6.3□□□□□ -1.4
USP3-215ENST00000559771 MAFFQ9ULX9 164 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 NDRG2Q9UN36 371 aaKnown RBP6.3□□□□□ -1.4
USP3-215ENST00000559771 SMG5Q9UPR3 1016 aaKnown RBP6.3□□□□□ -1.4
USP3-215ENST00000559771 NUB1Q9Y5A7 615 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 PIAS3Q9Y6X2 628 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 NCOR2Q9Y618 2525 aa6.3□□□□□ -1.4
USP3-215ENST00000559771 EML5Q05BV3 1969 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 A0A0B4J269 797 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ANO9A1A5B4 782 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 MTMR11A4FU01 709 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 VWA3AA6NCI4 1184 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ANKRD63C9JTQ0 380 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 K7ESF4 209 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 PIRO00625 290 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ZNF197O14709 1029 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 CLDN3O15551 220 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 PRAMEF12O95522 483 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 NFICP08651 508 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 CLTAP09496 248 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 CPB1P15086 417 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ATF6P18850 670 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 TYMPP19971 482 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ALAS2P22557 587 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 CCNE1P24864 410 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 LAMA1P25391 3075 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 MLLT6P55198 1093 aaPredicted RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 LILRA4P59901 499 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 YWHAHQ04917 246 aaPredicted RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 STRN3Q13033 797 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 SRSF5Q13243 272 aaKnown RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 GNL2Q13823 731 aaKnown RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 ZRSR1Q15695 479 aaKnown RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 RILPL1Q5EBL4 403 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 CYP4A22Q5TCH4 519 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 SPATA1Q5VX52 437 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 CRELD2Q6UXH1 353 aaPredicted RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 PRR23CQ6ZRP0 262 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 Q6ZS52 159 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 TMEM150AQ86TG1 271 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 LRRTM3Q86VH5 581 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ATAD1Q8NBU5 361 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 LEMD2Q8NC56 503 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 APPL2Q8NEU8 664 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 DEPDC1BQ8WUY9 529 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ATRIPQ8WXE1 791 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ZFYVE19Q96K21 471 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 SENP8Q96LD8 212 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 HINFPQ9BQA5 517 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 RAB34Q9BZG1 259 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 ASAH2Q9NR71 780 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 RBM12Q9NTZ6 932 aaKnown RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 KCND2Q9NZV8 630 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 TBX20Q9UMR3 447 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 UBQLN1Q9UMX0 589 aaKnown RBP6.29□□□□□ -1.4
USP3-215ENST00000559771 KIAA1549LQ6ZVL6 1849 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 F5P12259 2224 aa6.29□□□□□ -1.4
USP3-215ENST00000559771 MYO16Q9Y6X6 1858 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 MYBPHLA2RUH7 354 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 OTOL1A6NHN0 477 aaPredicted RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 OR6C75A6NL08 312 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 SLC38A8A6NNN8 435 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 MAN2B1O00754 1011 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 OGTO15294 1046 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 CHADO15335 359 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 NCAM2O15394 837 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 PAPSS2O95340 614 aaPredicted RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 CYP11A1P05108 521 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 NMT1P30419 496 aaKnown RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 ADSSP30520 456 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 SMTNP53814 917 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 GTF2BQ00403 316 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 PPP2R3AQ06190 1150 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 TNK2Q07912 1038 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 CCINQ13939 588 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 MYBPC2Q14324 1141 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 MCM6Q14566 821 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 ZC2HC1CQ53FD0 456 aaPredicted RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 C9orf57Q5W0N0 161 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 ARL6IP4Q66PJ3 421 aaKnown RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 OVOS1Q6IE37 1185 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 JADE1Q6IE81 842 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 IQCEQ6IPM2 695 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 PKN3Q6P5Z2 889 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 SPOCD1Q6ZMY3 1216 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 USP49Q70CQ1 688 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 DNAJB7Q7Z6W7 309 aaPredicted RBP6.28□□□□□ -1.4
USP3-215ENST00000559771 SYT9Q86SS6 491 aa6.28□□□□□ -1.4
USP3-215ENST00000559771 ARID3BQ8IVW6 561 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms