RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 BCAT1P54687 386 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 OGDHQ02218 1023 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 ZNF252P-AS1Q0IIN9 211 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 BST2Q10589 180 aaKnown RBP18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 MESDQ14696 234 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 STILQ15468 1287 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 PPP1R15BQ5SWA1 713 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 SPOUT1Q5T280 376 aaKnown RBP18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 FAM171BQ6P995 826 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 KCNT2Q6UVM3 1135 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 PRSS55Q6UWB4 352 aaPredicted RBP18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 FAM183BPQ6ZVS7 135 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 LRRN4CLQ8ND94 238 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 JOSD2Q8TAC2 188 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 MCEEQ96PE7 176 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 KCNK16Q96T55 309 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 YME1L1Q96TA2 773 aa18.3■□□□□ 0.52
CHRNA3-206ENST00000559658 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 OAZ2O95190 189 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 GJB5O95377 273 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 CALB1P05937 261 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 HADHBP55084 474 aaKnown RBP18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 TAF5Q15542 800 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 GPRIN1Q7Z2K8 1008 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 SLFN11Q7Z7L1 901 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 TRIM11Q96F44 468 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 IGSF21Q96ID5 467 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 VCPIP1Q96JH7 1222 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 SMOQ99835 787 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 SYNCQ9H7C4 482 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 UVRAGQ9P2Y5 699 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 LCHNA4D1U4 455 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 CCDC85CA6NKD9 419 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 ZNF185O15231 689 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 NPR3P17342 541 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 CXCR5P32302 372 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 GABRB2P47870 512 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 MARCKSL1P49006 195 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 ALDH7A1P49419 539 aaKnown RBP18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 MAP3K7CLP57077 242 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 PLCB3Q01970 1234 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 SLC39A12Q504Y0 691 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 LIN9Q5TKA1 542 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 TRNP1Q6NT89 227 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 DNAJC24Q6P3W2 148 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 NT5DC3Q86UY8 548 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 PIGZQ86VD9 579 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 CMTR2Q8IYT2 770 aaKnown RBP18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 EMC1Q8N766 993 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 STKLD1Q8NE28 680 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 NDRG1Q92597 394 aaKnown RBP18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 DPF3Q92784 378 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 C18orf8Q96DM3 657 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 SLC4A5Q9BY07 1137 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 DUSP16Q9BY84 665 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 ABCB6Q9NP58 842 aa18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 METTL5Q9NRN9 209 aaKnown RBP18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
CHRNA3-206ENST00000559658 GBF1Q92538 1859 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 PLXNA4Q9HCM2 1894 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 SYN3O14994 580 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 PAPSS1O43252 624 aaPredicted RBP18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 TRAPPC3O43617 180 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 GRAP2O75791 330 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 AP1G2O75843 785 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 BDNFP23560 247 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 MRPL58Q14197 206 aaKnown RBP18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 SPRED2Q7Z698 418 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 RNF168Q8IYW5 571 aaPredicted RBP18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 TTC9BQ8N6N2 239 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 COLGALT1Q8NBJ5 622 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 C3orf20Q8ND61 904 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 SPATA18Q8TC71 538 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 PGLYRP2Q96PD5 576 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 MIS12Q9H081 205 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 JRKLQ9Y4A0 524 aa18.28■□□□□ 0.52
CHRNA3-206ENST00000559658 ADAM12O43184 909 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 TUBB4AP04350 444 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 FAM200BP0CF97 657 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 LCP1P13796 627 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 RPL17P18621 184 aaKnown RBP18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 COMTP21964 271 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 PAX3P23760 479 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 CTXN3Q4LDR2 81 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 PSRC1Q6PGN9 363 aaPredicted RBP18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 SLC39A11Q8N1S5 342 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 COG1Q8WTW3 980 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 HTATIP2Q9BUP3 242 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 ZCWPW1Q9H0M4 648 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 PARVAQ9NVD7 372 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 EHD2Q9NZN4 543 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 ALG6Q9Y672 507 aa18.27■□□□□ 0.52
CHRNA3-206ENST00000559658 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 TCF4P15884 667 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 RFC1P35251 1148 aaPredicted RBP18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 PLA2G4AP47712 749 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 HTRA4P83105 476 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms