RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TRMT2BQ96GJ1 504 aaKnown RBP13.43□□□□□ -0.26
LRRC28-214ENST00000559433 PCED1BQ96HM7 432 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 TSG101Q99816 390 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 GTPBP4Q9BZE4 634 aaKnown RBP13.43□□□□□ -0.26
LRRC28-214ENST00000559433 MMRN2Q9H8L6 949 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 HEBP1Q9NRV9 189 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 THG1LQ9NWX6 298 aaKnown RBP13.43□□□□□ -0.26
LRRC28-214ENST00000559433 PATJQ8NI35 1801 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 CETN3O15182 167 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 GADD45BO75293 160 aaPredicted RBP13.42□□□□□ -0.26
LRRC28-214ENST00000559433 PRAMEF12O95522 483 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 HLA-DRAP01903 254 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 F11P03951 625 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
LRRC28-214ENST00000559433 PTPN1P18031 435 aaKnown RBP13.42□□□□□ -0.26
LRRC28-214ENST00000559433 DDX6P26196 483 aaKnown RBP eCLIP13.42□□□□□ -0.26
LRRC28-214ENST00000559433 GCLMP48507 274 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 CDH8P55286 799 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 ANGPT1Q15389 498 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 COBLL1Q53SF7 1204 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 SPOPLQ6IQ16 392 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 MAB21L3Q8N8X9 362 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 B3GALNT2Q8NCR0 500 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 SPATA20Q8TB22 786 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 MRPS31Q92665 395 aaKnown RBP13.42□□□□□ -0.26
LRRC28-214ENST00000559433 TAF4BQ92750 862 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 EEF2KMTQ96G04 330 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 IMPG2Q9BZV3 1241 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 SMG9Q9H0W8 520 aaKnown RBP13.42□□□□□ -0.26
LRRC28-214ENST00000559433 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.42□□□□□ -0.267e-8■■■■■ 186.3
LRRC28-214ENST00000559433 ZMYM5Q9UJ78 669 aa13.42□□□□□ -0.26
LRRC28-214ENST00000559433 CACNA1HO95180 2353 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 TRIM66O15016 1216 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ASS1P00966 412 aaKnown RBP13.41□□□□□ -0.26
LRRC28-214ENST00000559433 CD72P21854 359 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 WEE1P30291 646 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 AVPR1AP37288 418 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
LRRC28-214ENST00000559433 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ENPEPQ07075 957 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 PPP3CAQ08209 521 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 STIM1Q13586 685 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 TXNDC8Q6A555 127 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ISM2Q6H9L7 571 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 C1orf210Q8IVY1 113 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ELOA2Q8IYF1 753 aaPredicted RBP13.41□□□□□ -0.26
LRRC28-214ENST00000559433 CMTM8Q8IZV2 173 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ADSSL1Q8N142 457 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 TNIP3Q96KP6 325 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 SPATA17Q96L03 361 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 MYRFLQ96LU7 910 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 DDX23Q9BUQ8 820 aaKnown RBP13.41□□□□□ -0.26
LRRC28-214ENST00000559433 SLC46A2Q9BY10 475 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 OSBPL6Q9BZF3 934 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ELOVL4Q9GZR5 314 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 SDCBP2Q9H190 292 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 SPATA6Q9NWH7 488 aaPredicted RBP13.41□□□□□ -0.26
LRRC28-214ENST00000559433 OBP2AQ9NY56 170 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 CHMP5Q9NZZ3 219 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
LRRC28-214ENST00000559433 ATP8B3O60423 1300 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 ZFHX2Q9C0A1 2572 aaPredicted RBP13.4□□□□□ -0.26
LRRC28-214ENST00000559433 F8VP50 259 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 CLDN5O00501 218 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 PSMA7O14818 248 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 CHADO15335 359 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 LRRN2O75325 713 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 TADA3O75528 432 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 GLULP15104 373 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 GTF2H1P32780 548 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 MAGEA9P43362 315 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 ASPAP45381 313 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 NOP14P78316 857 aaKnown RBP13.4□□□□□ -0.26
LRRC28-214ENST00000559433 FCHO2Q0JRZ9 810 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 ANKRD40Q6AI12 368 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 DENND5BQ6ZUT9 1274 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 MON1AQ86VX9 555 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 CELF5Q8N6W0 485 aaKnown RBP13.4□□□□□ -0.26
LRRC28-214ENST00000559433 CCDC150Q8NCX0 1101 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 BPIFB1Q8TDL5 484 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 TAS1R2Q8TE23 839 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 C8orf48Q96LL4 319 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 CEP295NLQ96MC4 621 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 LRRC3BQ96PB8 259 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 PHOX2BQ99453 314 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 MED10Q9BTT4 135 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 B3GNT5Q9BYG0 378 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 ZNF518BQ9C0D4 1074 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 TMEM8AQ9HCN3 771 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 TRPC7Q9HCX4 862 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
LRRC28-214ENST00000559433 PIAS3Q9Y6X2 628 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
LRRC28-214ENST00000559433 TRAV19A0A0A6YYK7 116 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 SOBPA7XYQ1 873 aa13.39□□□□□ -0.27
LRRC28-214ENST00000559433 ARNTLO00327 626 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 429.2 ms