RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 AMPD2Q01433 879 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 PRKCQQ04759 706 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 PPP3CAQ08209 521 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 MORC3Q14149 939 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TPD52L1Q16890 204 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 SLC44A4Q53GD3 710 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 SCARA3Q6AZY7 606 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 ASTLQ6HA08 431 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 TANGO2Q6ICL3 276 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CC2D1AQ6P1N0 951 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 ZNF852Q6ZMS4 543 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 DENND5BQ6ZUT9 1274 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 GAREM2Q75VX8 874 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 OSTM1Q86WC4 334 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TMC8Q8IU68 726 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 ARID3BQ8IVW6 561 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 MFSD6LQ8IWD5 586 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CMTM8Q8IZV2 173 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CELF5Q8N6W0 485 aaKnown RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 MLKLQ8NB16 471 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 STKLD1Q8NE28 680 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 PDZD8Q8NEN9 1154 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 ST13P5Q8NFI4 369 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 SHKBP1Q8TBC3 707 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 PLEKHO2Q8TD55 490 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 BPIFB1Q8TDL5 484 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CSGALNACT1Q8TDX6 532 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TAS1R2Q8TE23 839 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 DNASE1L2Q92874 299 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 MYLPFQ96A32 169 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 EXOC4Q96A65 974 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TRMT2BQ96GJ1 504 aaKnown RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 SMARCD1Q96GM5 515 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 C8orf48Q96LL4 319 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 MYRFLQ96LU7 910 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 ZSWIM3Q96MP5 696 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 NELL2Q99435 816 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 PKMYT1Q99640 499 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 KXD1Q9BQD3 176 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 RPP25Q9BUL9 199 aaKnown RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 NT5C1AQ9BXI3 368 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 LRRC3Q9BY71 257 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 NIF3L1Q9GZT8 377 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 GZF1Q9H116 711 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 NUP62CLQ9H1M0 184 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 SMOC2Q9H3U7 446 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 FBXO44Q9H4M3 255 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TRPV4Q9HBA0 871 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 DMAP1Q9NPF5 467 aaPredicted RBP4.65□□□□□ -1.67
SNX1-205ENST00000559339 CRTAC1Q9NQ79 661 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 TDP1Q9NUW8 608 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 OBP2AQ9NY56 170 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 RWDD2AQ9UIY3 292 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CA14Q9ULX7 337 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 CTNND2Q9UQB3 1225 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 SIT1Q9Y3P8 196 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.65□□□□□ -1.67
SNX1-205ENST00000559339 TRIP11Q15643 1979 aa4.65□□□□□ -1.67
SNX1-205ENST00000559339 VWA8A3KMH1 1905 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 TRAV19A0A0A6YYK7 116 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 KANSL1LA0AUZ9 987 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 HEPACAM2A8MVW5 462 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 PPP1R3GB7ZBB8 358 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 F8VP50 259 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 PMM2O15305 246 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 CHADO15335 359 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ATMINO43313 823 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 HCRTO43612 131 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 CILPO75339 1184 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 AP1G2O75843 785 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 NOL4O94818 638 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ABL1P00519 1130 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 F11P03951 625 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 CKMP06732 381 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 USP17L7P0C7H9 530 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FAM200BP0CF97 657 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 PRKCSHP14314 528 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 HMGA1P17096 107 aaKnown RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 HDCP19113 662 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 AOC1P19801 751 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 YWHAQP27348 245 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 GDI1P31150 447 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 ASPAP45381 313 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 RAP1GAPP47736 663 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FMO5P49326 533 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 GPR15P49685 360 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 KPNA1P52294 538 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 NDST1P52848 882 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 PTPN5P54829 565 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 MLLT6P55198 1093 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 STARD6P59095 220 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 MCCD1P59942 119 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 CYP4F8P98187 520 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 FCHO2Q0JRZ9 810 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 INCA1Q0VD86 236 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 GRM2Q14416 872 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 PPP2R5DQ14738 602 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 UBXN2BQ14CS0 331 aa4.64□□□□□ -1.67
SNX1-205ENST00000559339 MLF2Q15773 248 aaPredicted RBP4.64□□□□□ -1.67
SNX1-205ENST00000559339 ARHGAP29Q52LW3 1261 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms