RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 KIAA1586Q9HCI6 787 aa16.33■□□□□ 0.2
IRF9-204ENST00000559229 TRPC7Q9HCX4 862 aa16.33■□□□□ 0.2
IRF9-204ENST00000559229 KBTBD4Q9NVX7 518 aa16.33■□□□□ 0.2
IRF9-204ENST00000559229 DUS2Q9NX74 493 aaKnown RBP16.33■□□□□ 0.2
IRF9-204ENST00000559229 GCNT4Q9P109 453 aa16.33■□□□□ 0.2
IRF9-204ENST00000559229 MAGEC2Q9UBF1 373 aaPredicted RBP16.33■□□□□ 0.2
IRF9-204ENST00000559229 CDH9Q9ULB4 789 aa16.33■□□□□ 0.2
IRF9-204ENST00000559229 STX6O43752 255 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 RNF40O75150 1001 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 ATP2C2O75185 946 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 RPP40O75818 363 aaKnown RBP16.32■□□□□ 0.2
IRF9-204ENST00000559229 CKMP06732 381 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 TCF3P15923 654 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 HOXD13P35453 343 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 PXNP49023 591 aaPredicted RBP16.32■□□□□ 0.2
IRF9-204ENST00000559229 AMPD3Q01432 767 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 TCHHQ07283 1943 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 PTPRJQ12913 1337 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 STK38Q15208 465 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 MAPRE1Q15691 268 aaKnown RBP16.32■□□□□ 0.2
IRF9-204ENST00000559229 E2F4Q16254 413 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 VSTM1Q6UX27 236 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 CACNA2D4Q7Z3S7 1137 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 WDR49Q8IV35 697 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 ARL14EPQ8N8R7 260 aaPredicted RBP16.32■□□□□ 0.2
IRF9-204ENST00000559229 ATP2A3Q93084 1043 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 HPS3Q969F9 1004 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 SYT15Q9BQS2 421 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 HSPBP1Q9NZL4 362 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 LAMA1P25391 3075 aa16.32■□□□□ 0.2
IRF9-204ENST00000559229 ACACBO00763 2458 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 SPTLC2O15270 562 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 EIF3DO15371 548 aaKnown RBP eCLIP16.31■□□□□ 0.2
IRF9-204ENST00000559229 PPP6R2O75170 966 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 AKAP3O75969 853 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 HDCP19113 662 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 WARSP23381 471 aaKnown RBP16.31■□□□□ 0.2
IRF9-204ENST00000559229 IFNAR2P48551 515 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 USP4Q13107 963 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 EML3Q32P44 896 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 CNNM4Q6P4Q7 775 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 ZNF507Q8TCN5 953 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 MYLPFQ96A32 169 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 CRTAC1Q9NQ79 661 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 CACNA1GO43497 2377 aa16.31■□□□□ 0.2
IRF9-204ENST00000559229 KIF26AQ9ULI4 1882 aaPredicted RBP16.31■□□□□ 0.2
IRF9-204ENST00000559229 C2orf78A6NCI8 922 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 AXIN1O15169 862 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 GDF9O60383 454 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 PDGFRBP09619 1106 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 FAM163BP0C2L3 166 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 ZNF806P0C7X5 589 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 PFKLP17858 780 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 BDNFP23560 247 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 GRIK1P39086 918 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 PDE6CP51160 858 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 PSMC1P62191 440 aaKnown RBP16.3■□□□□ 0.2
IRF9-204ENST00000559229 NR1H3Q13133 447 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 KCNB1Q14721 858 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 NAIF1Q69YI7 327 aaPredicted RBP16.3■□□□□ 0.2
IRF9-204ENST00000559229 EPM2AIP1Q7L775 607 aaPredicted RBP16.3■□□□□ 0.2
IRF9-204ENST00000559229 TRAPPC11Q7Z392 1133 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 IQUBQ8NA54 791 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 MYCBPAPQ8TBZ2 947 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 SH3RF2Q8TEC5 729 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 CD101Q93033 1021 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 ZC3H10Q96K80 434 aaKnown RBP16.3■□□□□ 0.2
IRF9-204ENST00000559229 MMS19Q96T76 1030 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 ARRDC1-AS1Q9H2J1 176 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 ARHGAP26Q9UNA1 814 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 WNT6Q9Y6F9 365 aa16.3■□□□□ 0.2
IRF9-204ENST00000559229 DENND4CQ5VZ89 1909 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 SDK1Q7Z5N4 2213 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 TACC1O75410 805 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 EPN2O95208 641 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 ADRB1P08588 477 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 CCDC192P0DO97 292 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 GNL1P36915 607 aaPredicted RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 SNRPFP62306 86 aaKnown RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 SNRNP35Q16560 246 aaKnown RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 DENND5BQ6ZUT9 1274 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 SYT13Q7L8C5 426 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 KBTBD6Q86V97 674 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 TTC16Q8NEE8 873 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 RPLP0P6Q8NHW5 317 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 DDX1Q92499 740 aaKnown RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 PCED1BQ96HM7 432 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 TTLL2Q9BWV7 592 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 LINC00597Q9H2U6 94 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 AGPAT3Q9NRZ7 376 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
IRF9-204ENST00000559229 POLR3BQ9NW08 1133 aaPredicted RBP16.29■□□□□ 0.2
IRF9-204ENST00000559229 EHD2Q9NZN4 543 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms