RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SLC27A5Q9Y2P5 690 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 YIPF1Q9Y548 306 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 BZW2Q9Y6E2 419 aaKnown RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 COL4A4P53420 1690 aaPredicted RBP6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 VWA8A3KMH1 1905 aa6.99□□□□□ -1.29
CHRNA3-204ENST00000559002 F8VP50 259 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TRIM66O15016 1216 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 C1RP00736 705 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 LRG1P02750 347 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 C8AP07357 584 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 MMEP08473 750 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 HAPLN1P10915 354 aaPredicted RBP6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 SKILP12757 684 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 FOSL2P15408 326 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 EPCAMP16422 314 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 NPR3P17342 541 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TNFAIP3P21580 790 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 CYP2F1P24903 491 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 HNRNPH3P31942 346 aaKnown RBP6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 SSTR3P32745 418 aaPredicted RBP6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 PRKCIP41743 596 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 MAGEA11P43364 429 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 ALDH1A3P47895 512 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 EPHB3P54753 998 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 MAP3K7CLP57077 242 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 CDR2Q01850 454 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 CCDC173Q0VFZ6 552 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 ADGRE1Q14246 886 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 ARID5BQ14865 1188 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 VEPH1Q14D04 833 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TAF12Q16514 161 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 PPM1LQ5SGD2 360 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 LILRA6Q6PI73 481 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 LCLAT1Q6UWP7 414 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TRIM72Q6ZMU5 477 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 CLEC20AQ6ZU45 233 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 CCDC186Q7Z3E2 898 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 IRF2BP2Q7Z5L9 587 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TTC30AQ86WT1 665 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 PASD1Q8IV76 773 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TCEAL8Q8IYN2 117 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 ELMOD1Q8N336 334 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TC2NQ8N9U0 490 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 ANKRD52Q8NB46 1076 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 TMEM35BQ8NCS4 154 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 MSANTD4Q8NCY6 345 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC7A14Q8TBB6 771 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 UBA3Q8TBC4 463 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 HDAC7Q8WUI4 952 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 SLC20A1Q8WUM9 679 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 MYLIPQ8WY64 445 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 CASP10Q92851 521 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 SECISBP2LQ93073 1101 aaKnown RBP6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 PANX2Q96RD6 677 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 CDX2Q99626 313 aaPredicted RBP6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 AGPAT1Q99943 283 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 ZSWIM1Q9BR11 485 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 DUSP16Q9BY84 665 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 RHOBTB2Q9BYZ6 727 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 HAUS4Q9H6D7 363 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 SYNCQ9H7C4 482 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 DZANK1Q9NVP4 752 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 HSFX1Q9UBD0 423 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 NOCTQ9UK39 431 aaKnown RBP6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 PCDHGC3Q9UN70 934 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 INSL5Q9Y5Q6 135 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 HCFC2Q9Y5Z7 792 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 MTCH2Q9Y6C9 303 aa6.98□□□□□ -1.29
CHRNA3-204ENST00000559002 SSU72P8A0A1W2PR75 194 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 XPO1O14980 1071 aaKnown RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 NCK2O43639 380 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 AKR1B10O60218 316 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 XYLBO75191 536 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 ZMYND10O75800 440 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 SOAT2O75908 522 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 SEC24AO95486 1093 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 VNN2O95498 520 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 LSM8O95777 96 aaKnown RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 CHRNB2P17787 502 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 POU3F3P20264 500 aaPredicted RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 EIF4A3P38919 411 aaKnown RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 NSFP46459 744 aaKnown RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 SNX16P57768 344 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 FMO1Q01740 532 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 PDE4CQ08493 712 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 TWF1Q12792 350 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 HYAL1Q12794 435 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 IFRD2Q12894 506 aaPredicted RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 DDR2Q16832 855 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 HGSNATQ68CP4 663 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 PPP1R2P3Q6NXS1 205 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 DENND1BQ6P3S1 775 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 WDR59Q6PJI9 974 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 CYP26C1Q6V0L0 522 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 EP400NLQ6ZTU2 488 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 PAQR9Q6ZVX9 377 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 RTL10Q7L3V2 364 aa6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 ZNF571Q7Z3V5 609 aaPredicted RBP6.97□□□□□ -1.29
CHRNA3-204ENST00000559002 ITIH5Q86UX2 942 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms