RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CRTAC1Q9NQ79 661 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 ARHGEF3Q9NR81 526 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 GDE1Q9NZC3 331 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 MAGEC2Q9UBF1 373 aaPredicted RBP12.83□□□□□ -0.36
TPM1-216ENST00000558910 MAFFQ9ULX9 164 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 NME7Q9Y5B8 376 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 ZFP37Q9Y6Q3 630 aaPredicted RBP12.83□□□□□ -0.36
TPM1-216ENST00000558910 COL4A3Q01955 1670 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 HEPACAM2A8MVW5 462 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 H0Y858 1186 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 ABL1P00519 1130 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 HLA-DRAP01903 254 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 C4BPAP04003 597 aaKnown RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 NPR3P17342 541 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 CD58P19256 250 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 WARSP23381 471 aaKnown RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 RPL13P26373 211 aaKnown RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 GDI1P31150 447 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 PSMC2P35998 433 aaKnown RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 PMS1P54277 932 aaKnown RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 STX17P56962 302 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 UBXN2BQ14CS0 331 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 ARHGAP15Q53QZ3 475 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 DCAF17Q5H9S7 520 aaPredicted RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 ZNF658Q5TYW1 1059 aaPredicted RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 CWF19L1Q69YN2 538 aaKnown RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 BMP8AQ7Z5Y6 402 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 SLC9A9Q8IVB4 645 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 YAF2Q8IY57 180 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 SMARCD2Q92925 531 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 RSPRY1Q96DX4 576 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 THAP11Q96EK4 314 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 ZFYVE19Q96K21 471 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 ASB16Q96NS5 453 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 LRRC3Q9BY71 257 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 SDCBP2Q9H190 292 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 BRD9Q9H8M2 597 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 HEBP1Q9NRV9 189 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 HOOK1Q9UJC3 728 aaKnown RBP12.82□□□□□ -0.36
TPM1-216ENST00000558910 MAN1B1Q9UKM7 699 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 CDH9Q9ULB4 789 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 TRAF3IP3Q9Y228 551 aa12.82□□□□□ -0.36
TPM1-216ENST00000558910 SLC38A8A6NNN8 435 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 GABRDO14764 452 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 CETN3O15182 167 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 EPB41P11171 864 aaKnown RBP12.81□□□□□ -0.36
TPM1-216ENST00000558910 PTPN1P18031 435 aaKnown RBP12.81□□□□□ -0.36
TPM1-216ENST00000558910 FCARP24071 287 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 SLC44A4Q53GD3 710 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 C1orf220Q5T0J3 134 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 TXNDC8Q6A555 127 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 ANKRD40Q6AI12 368 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 VITQ6UXI7 678 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 C4orf50Q6ZRC1 276 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 TPRG1Q6ZUI0 275 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 ARID3BQ8IVW6 561 aaPredicted RBP12.81□□□□□ -0.36
TPM1-216ENST00000558910 MAB21L3Q8N8X9 362 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 TAS1R2Q8TE23 839 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 C2orf15Q8WU43 125 aaKnown RBP12.81□□□□□ -0.36
TPM1-216ENST00000558910 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 PCED1BQ96HM7 432 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 TRMT61BQ9BVS5 477 aaKnown RBP12.81□□□□□ -0.36
TPM1-216ENST00000558910 ZNF518BQ9C0D4 1074 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 XYLT2Q9H1B5 865 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 AVENQ9NQS1 362 aaPredicted RBP12.81□□□□□ -0.36
TPM1-216ENST00000558910 NDRG2Q9UN36 371 aaKnown RBP12.81□□□□□ -0.36
TPM1-216ENST00000558910 CTNND2Q9UQB3 1225 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 ASB3Q9Y575 518 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 MUC6Q6W4X9 2439 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 NCANO14594 1321 aa12.81□□□□□ -0.36
TPM1-216ENST00000558910 ECI2O75521 394 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 PRAMEF12O95522 483 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 ANXA13P27216 316 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 ATICP31939 592 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 CACNA2D1P54289 1103 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 RPL10AP62906 217 aaKnown RBP12.8□□□□□ -0.36
TPM1-216ENST00000558910 SMARCB1Q12824 385 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 MLF2Q15773 248 aaPredicted RBP12.8□□□□□ -0.36
TPM1-216ENST00000558910 ACOT1Q86TX2 421 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 LEMD2Q8NC56 503 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 ELSPBP1Q96BH3 223 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 GSDMAQ96QA5 445 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 PKMYT1Q99640 499 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 FAM49BQ9NUQ9 324 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 WNT16Q9UBV4 365 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 HMGXB4Q9UGU5 601 aa12.8□□□□□ -0.36
TPM1-216ENST00000558910 CACNA1AO00555 2505 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 F8VP50 259 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 ZNF263O14978 683 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 CSH1P0DML2 217 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 CSH2P0DML3 217 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 CCDC130P13994 396 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 HMGA1P17096 107 aaKnown RBP12.79□□□□□ -0.36
TPM1-216ENST00000558910 ADORA2BP29275 332 aa12.79□□□□□ -0.36
TPM1-216ENST00000558910 CDC25CP30307 473 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms