RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 PHLPP2Q6ZVD8 1323 aa10.57□□□□□ -0.72
SPG11-212ENST00000558790 SMIM28A0A1B0GU29 152 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 A0A1W2PP55 124 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 M0R082 166 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 PODXLO00592 558 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 NCAM2O15394 837 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 TRAPPC3O43617 180 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
SPG11-212ENST00000558790 ABLIM3O94929 683 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 SEC24AO95486 1093 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 OR52Z1P0C646 297 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 PTPN2P17706 415 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 RPA1P27694 616 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 EFNA5P52803 228 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ARPP19P56211 112 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 OSTNP61366 133 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ST3GAL1Q11201 340 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ANKRD1Q15327 319 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 LPAL2Q16609 132 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ZNF568Q3ZCX4 644 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 VITQ6UXI7 678 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 PDZD4Q76G19 769 aaPredicted RBP10.56□□□□□ -0.72
SPG11-212ENST00000558790 ZSCAN1Q8NBB4 408 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ZNF461Q8TAF7 563 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ERMNQ8TAM6 284 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ZNF417Q8TAU3 575 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 IFT74Q96LB3 600 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 ZMAT2Q96NC0 199 aaKnown RBP10.56□□□□□ -0.72
SPG11-212ENST00000558790 ZNF587Q96SQ5 575 aaPredicted RBP10.56□□□□□ -0.72
SPG11-212ENST00000558790 NELL2Q99435 816 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 RBSNQ9H1K0 784 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 CDT1Q9H211 546 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 BRD9Q9H8M2 597 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 CYP4F11Q9HBI6 524 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 NUP205Q92621 2012 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 CELSR3Q9NYQ7 3312 aa10.56□□□□□ -0.72
SPG11-212ENST00000558790 HELZP42694 1942 aaKnown RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 ADAMTS20P59510 1910 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 MEFVO15553 781 aaPredicted RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 TBC1D4O60343 1298 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 RGS9O75916 674 aaPredicted RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 ATF2P15336 505 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 ELF1P32519 619 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 GUCY1B3Q02153 619 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 TRIM29Q14134 588 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 XKR4Q5GH76 650 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 CEP135Q66GS9 1140 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 HAUS3Q68CZ6 603 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 ALG1LQ6GMV1 187 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 LRSAM1Q6UWE0 723 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 ALKAL1Q6UXT8 129 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 ADAMTSL4Q6UY14 1074 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 TCEAL8Q8IYN2 117 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 KIFAP3Q92845 792 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 C18orf25Q96B23 403 aaPredicted RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 ZSWIM3Q96MP5 696 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 FAM126AQ9BYI3 521 aaPredicted RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 BHMT2Q9H2M3 363 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 ZFP14Q9HCL3 533 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 TOPORSQ9NS56 1045 aaPredicted RBP10.55□□□□□ -0.72
SPG11-212ENST00000558790 FBXL5Q9UKA1 691 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 GMEB2Q9UKD1 530 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 TRIM33Q9UPN9 1127 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 TNFSF13BQ9Y275 285 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 PIAS3Q9Y6X2 628 aa10.55□□□□□ -0.72
SPG11-212ENST00000558790 MAN2B1O00754 1011 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 SYN3O14994 580 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 PRPF40AO75400 957 aaKnown RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 MOSPD3O75425 235 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 GJA1P17302 382 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 GDI1P31150 447 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 VIPR2P41587 438 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 YARSP54577 528 aaKnown RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 ANAPC15P60006 121 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 SHC2P98077 582 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 RING1Q06587 406 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 TWF1Q12792 350 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 MRPL58Q14197 206 aaKnown RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 ZNF174Q15697 407 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 APBB1IPQ7Z5R6 666 aaPredicted RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 MAP4K3Q8IVH8 894 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 TMEM130Q8N3G9 435 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 SMARCD2Q92925 531 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 ACO2Q99798 780 aaKnown RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 IER2Q9BTL4 223 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 TRMT61BQ9BVS5 477 aaKnown RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 CCDC94Q9BW85 323 aaPredicted RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 ZNF334Q9HCZ1 680 aaPredicted RBP10.54□□□□□ -0.72
SPG11-212ENST00000558790 PTPRHQ9HD43 1115 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 SLC38A7Q9NVC3 462 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 CEP72Q9P209 647 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 ANAPC1Q9H1A4 1944 aa10.54□□□□□ -0.72
SPG11-212ENST00000558790 CCDC169A6NNP5 214 aa10.53□□□□□ -0.72
SPG11-212ENST00000558790 K7ERI5 159 aa10.53□□□□□ -0.72
SPG11-212ENST00000558790 ARNTLO00327 626 aa10.53□□□□□ -0.72
SPG11-212ENST00000558790 ABLIM1O14639 778 aa10.53□□□□□ -0.72
SPG11-212ENST00000558790 ZNF197O14709 1029 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms