RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PDGFRBP09619 1106 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 PCSK1P29120 753 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 MYO1EQ12965 1108 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 CUL4BQ13620 913 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 LRRC32Q14392 662 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 PON2Q15165 354 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 SNRNP35Q16560 246 aaKnown RBP12.34□□□□□ -0.43
CASC4-205ENST00000558735 ITPRIPL2Q3MIP1 535 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 CFAP221Q4G0U5 840 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 RESP18Q5W5W9 173 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 UNC13DQ70J99 1090 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 SPATA2LQ8IUW3 424 aaPredicted RBP12.34□□□□□ -0.43
CASC4-205ENST00000558735 WDR49Q8IV35 697 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 MRPS31Q92665 395 aaKnown RBP12.34□□□□□ -0.43
CASC4-205ENST00000558735 LOXL4Q96JB6 756 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 CYP2S1Q96SQ9 504 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
CASC4-205ENST00000558735 CRTAC1Q9NQ79 661 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 HPS4Q9NQG7 708 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 TDP1Q9NUW8 608 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 C2orf42Q9NWW7 574 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 NME7Q9Y5B8 376 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 TSC2P49815 1807 aa12.34□□□□□ -0.43
CASC4-205ENST00000558735 TCHHQ07283 1943 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 PVALEFA0A1B0GWK0 134 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 CHURC1-FNTBB4DL54 471 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 TADA3O75528 432 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 DLATP10515 647 aaKnown RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 WARSP23381 471 aaKnown RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 DDX6P26196 483 aaKnown RBP eCLIP12.33□□□□□ -0.44
CASC4-205ENST00000558735 HOXC13P31276 330 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 AVPR1AP37288 418 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 MAGEA11P43364 429 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 AFMP43652 599 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 ME1P48163 572 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 FNTBP49356 437 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 CYP2J2P51589 502 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 SNRPFP62306 86 aaKnown RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 DNM1Q05193 864 aaKnown RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 DMWDQ09019 674 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 RUNX3Q13761 415 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 CCINQ13939 588 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 PSMD6Q15008 389 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 DGKKQ5KSL6 1271 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 N4BP2L1Q5TBK1 243 aaPredicted RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 TRIM68Q6AZZ1 485 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 Q6ZS52 159 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 WDR5BQ86VZ2 330 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 SCN4BQ8IWT1 228 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 FAM160A2Q8N612 972 aaPredicted RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 XXYLT1Q8NBI6 393 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 CHFRQ96EP1 664 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 TRMT2BQ96GJ1 504 aaKnown RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 FUBP3Q96I24 572 aaKnown RBP eCLIP12.33□□□□□ -0.44
CASC4-205ENST00000558735 SLC22A12Q96S37 553 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 MAGEC2Q9UBF1 373 aaPredicted RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 UXTQ9UBK9 157 aaPredicted RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 CDH9Q9ULB4 789 aa12.33□□□□□ -0.44
CASC4-205ENST00000558735 R3HCC1Q9Y3T6 440 aaKnown RBP12.33□□□□□ -0.44
CASC4-205ENST00000558735 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 KLRC4O43908 158 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 HSP90AA1P07900 732 aaKnown RBP12.32□□□□□ -0.44
CASC4-205ENST00000558735 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 ZNF806P0C7X5 589 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 TNNI1P19237 187 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 BDNFP23560 247 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 GNL1P36915 607 aaPredicted RBP12.32□□□□□ -0.44
CASC4-205ENST00000558735 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
CASC4-205ENST00000558735 ZNF268Q14587 947 aaPredicted RBP12.32□□□□□ -0.44
CASC4-205ENST00000558735 KNOP1Q1ED39 458 aaKnown RBP12.32□□□□□ -0.44
CASC4-205ENST00000558735 BMT2Q1RMZ1 405 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 IL31Q6EBC2 164 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 HSCBQ8IWL3 235 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 GRAMD1CQ8IYS0 662 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 SYNPOQ8N3V7 929 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 MMS19Q96T76 1030 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 SYT15Q9BQS2 421 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 MRPL45Q9BRJ2 306 aaKnown RBP12.32□□□□□ -0.44
CASC4-205ENST00000558735 EBF3Q9H4W6 596 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 MAGEF1Q9HAY2 307 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 FBRSL1Q9HCM7 1045 aaKnown RBP12.32□□□□□ -0.44
CASC4-205ENST00000558735 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 SERTAD1Q9UHV2 236 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 CFAP45Q9UL16 551 aa12.32□□□□□ -0.44
CASC4-205ENST00000558735 TRDMT1O14717 391 aaKnown RBP12.31□□□□□ -0.44
CASC4-205ENST00000558735 TACC1O75410 805 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 PROS1P07225 676 aa12.31□□□□□ -0.44
CASC4-205ENST00000558735 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms