RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 SLC8A3P57103 927 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 PLEKHA7Q6IQ23 1121 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZC3H18Q86VM9 953 aaKnown RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 RASGEF1CQ8N431 466 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 RXFP2Q8WXD0 754 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 USP6NLQ92738 828 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 ERP44Q9BS26 406 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 MTRF1LQ9UGC7 380 aaKnown RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 PRG3Q9Y2Y8 225 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 TRIM17Q9Y577 477 aa11.38□□□□□ -0.59
CSPG4P5-201ENST00000558731 HOXD10P28358 340 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 MAGEA9P43362 315 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 CDH6P55285 790 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 ARPP19P56211 112 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 SOWAHAQ2M3V2 549 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 KRT71Q3SY84 523 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 RAB6CQ53S08 254 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 PMF1Q6P1K2 205 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 FAM183BPQ6ZVS7 135 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 C3orf20Q8ND61 904 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 CLEC4CQ8WTT0 213 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 PWWP2AQ96N64 755 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 MYCBPQ99417 103 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 PAAF1Q9BRP4 392 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 RAB6CQ9H0N0 254 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 HEY1Q9Y5J3 304 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 TMEM191CA6NGB0 347 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 MAP2K7O14733 419 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 PRPSAP2O60256 369 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 ACSL3O95573 720 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 THP07101 528 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 ATF2P15336 505 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 LIG3P49916 1009 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 CD302Q8IX05 232 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 LRRC4Q9HBW1 653 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 STARD7Q9NQZ5 370 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 TOMM70O94826 608 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 PAEPP09466 180 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 TM4SF4P48230 202 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 CLCNKBP51801 687 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 ADCY2Q08462 1091 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 MDH1BQ5I0G3 518 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 NETO2Q8NC67 525 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 TTC16Q8NEE8 873 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 LRRC45Q96CN5 670 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 BCO2Q9BYV7 579 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 GDF3Q9NR23 364 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 FAM114A2Q9NRY5 505 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
CSPG4P5-201ENST00000558731 CAPN9O14815 690 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CST8O60676 142 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CHRNA1P02708 482 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZSCAN5DPP0CG00 497 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 SDC4P31431 198 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 RPL21P46778 160 aaKnown RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ENPEPQ07075 957 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CUL1Q13616 776 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 C1orf228Q6PIY5 440 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CTU1Q7Z7A3 348 aaKnown RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 SMG8Q8ND04 991 aaKnown RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 OPA1O60313 960 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CD48P09326 243 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 HOXD8P13378 290 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ETS1P14921 441 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 HSPA6P17066 643 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 GJA9P57773 515 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 NME3Q13232 169 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 PIGHQ14442 188 aaPredicted RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CNGA2Q16280 664 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 SV2CQ496J9 727 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CEP57Q86XR8 500 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ARL8AQ96BM9 186 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 VCPIP1Q96JH7 1222 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ADAM33Q9BZ11 813 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 PLEKHA5Q9HAU0 1116 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 DDX43Q9NXZ2 648 aaKnown RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 HAS3O00219 553 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 CES2O00748 559 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 GPR182O15218 404 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 FGFR1P11362 822 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 MIPP30301 263 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 BRCC3P46736 316 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 MAP3K7CLP57077 242 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 TTC30AQ86WT1 665 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 XYLT1Q86Y38 959 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ADAM32Q8TC27 787 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 RBM41Q96IZ5 413 aaKnown RBP11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 TMEM121Q9BTD3 319 aa11.36□□□□□ -0.59
CSPG4P5-201ENST00000558731 ZNF518BQ9C0D4 1074 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms