RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ZNF317Q96PQ6 595 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 HEMGNQ9BXL5 484 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 TRIM7Q9C029 511 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SYNCQ9H7C4 482 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 RSAD1Q9HA92 442 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SPON1Q9HCB6 807 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SSU72Q9NP77 194 aaKnown RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 AAASQ9NRG9 546 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 NKIRAS1Q9NYS0 192 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 SLC24A2Q9UI40 661 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 BARX2Q9UMQ3 279 aaPredicted RBP8.75□□□□□ -1.01
SPG11-209ENST00000558253 FZD1Q9UP38 647 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 USTQ9Y2C2 406 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 SLC27A5Q9Y2P5 690 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 PAPPA2Q9BXP8 1791 aa8.75□□□□□ -1.01
SPG11-209ENST00000558253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 A0A1B0GUA9 196 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 CFAP69A5D8W1 941 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 LACTBL1A8MY62 500 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 HOXA2O43364 376 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 CILPO75339 1184 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 SPAG6O75602 509 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 LGALS2P05162 132 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 EDN1P05305 212 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 PGK2P07205 417 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 INSRRP14616 1297 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 CD19P15391 556 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 ATP2A2P16615 1042 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 ATF7P17544 494 aaPredicted RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 CD58P19256 250 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 FGFR4P22455 802 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 BRD2P25440 801 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 MARK3P27448 753 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 AXLP30530 894 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 SCNN1AP37088 669 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 GRM5P41594 1212 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 GTF2A2P52657 109 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 ZNF143P52747 638 aaPredicted RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 SEC24CP53992 1094 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 RPL7AP62424 266 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 PTPN11Q06124 597 aaPredicted RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 PDK2Q15119 407 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 OASLQ15646 514 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 CCDC142Q17RM4 750 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 Q3C1V9 767 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 WDR72Q3MJ13 1102 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 BOLA3Q53S33 107 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 TTC19Q6DKK2 380 aaPredicted RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 LCLAT1Q6UWP7 414 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 EEPD1Q7L9B9 569 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 ARCQ7LC44 396 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 PIGWQ7Z7B1 504 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 ANKRD23Q86SG2 305 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 PNMA8AQ86V59 439 aaPredicted RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 EXOC3L1Q86VI1 746 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 UNC93AQ86WB7 457 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 FBXO16Q8IX29 292 aaPredicted RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 LRRC71Q8N4P6 559 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 C1orf127Q8N9H9 656 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 SLC4A11Q8NBS3 891 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 SLC35B2Q8TB61 432 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 ARHGEF2Q92974 986 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 ZBTB9Q96C00 473 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 THAP11Q96EK4 314 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 MCRS1Q96EZ8 462 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 HPDLQ96IR7 371 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 RBM15Q96T37 977 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPG11-209ENST00000558253 TBCBQ99426 244 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 SELENOSQ9BQE4 189 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 CNPY3Q9BT09 278 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 MAK16Q9BXY0 300 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 TXNRD2Q9NNW7 524 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 CYLDQ9NQC7 956 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 NINJ2Q9NZG7 142 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 RNF181Q9P0P0 153 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 MORF4L1Q9UBU8 362 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPG11-209ENST00000558253 SMG5Q9UPR3 1016 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 R3HDM2Q9Y2K5 976 aaKnown RBP8.74□□□□□ -1.01
SPG11-209ENST00000558253 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 LCTP09848 1927 aa8.74□□□□□ -1.01
SPG11-209ENST00000558253 LRRD1A4D1F6 860 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 F8VP50 259 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 GPR25O00155 361 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 O00370 1275 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 XPOTO43592 962 aaKnown RBP8.73□□□□□ -1.01
SPG11-209ENST00000558253 KRT19P08727 400 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 KDELR1P24390 212 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 EPHX2P34913 555 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 ARSEP51690 589 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 ARL4CP56559 192 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 IFI35P80217 286 aaPredicted RBP8.73□□□□□ -1.01
SPG11-209ENST00000558253 IL9RQ01113 521 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 ACTN3Q08043 901 aaPredicted RBP8.73□□□□□ -1.01
SPG11-209ENST00000558253 P3H1Q32P28 736 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 RNF187Q5TA31 235 aaPredicted RBP8.73□□□□□ -1.01
SPG11-209ENST00000558253 TAPT1Q6NXT6 567 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 DENND1BQ6P3S1 775 aa8.73□□□□□ -1.01
SPG11-209ENST00000558253 MTHFD1LQ6UB35 978 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms