RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SPATA2LQ8IUW3 424 aaPredicted RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 CELF5Q8N6W0 485 aaKnown RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 KIAA0895Q8NCT3 520 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 PARD3BQ8TEW8 1205 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 SYAP1Q96A49 352 aaPredicted RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 SPATA17Q96L03 361 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 MKNK1Q9BUB5 465 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 KCTD10Q9H3F6 313 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 C8orf33Q9H7E9 229 aaPredicted RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 TMLHEQ9NVH6 421 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 THG1LQ9NWX6 298 aaKnown RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 MAGEC2Q9UBF1 373 aaPredicted RBP10.82□□□□□ -0.68
USP3-207ENST00000558218 FBXO4Q9UKT5 387 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 TRAF3IP3Q9Y228 551 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 F5P12259 2224 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 PTPRJQ12913 1337 aa10.82□□□□□ -0.68
USP3-207ENST00000558218 ARNTLO00327 626 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 NRG2O14511 850 aaPredicted RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 CALUO43852 315 aaPredicted RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 SOAT2O75908 522 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 NOL4O94818 638 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 ZNF202O95125 648 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 S1PR4O95977 384 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 DCNP07585 359 aaKnown RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 RPL13P26373 211 aaKnown RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 PPP3CCP48454 512 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 NDUFA8P51970 172 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 NLRP12P59046 1061 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 MCCD1P59942 119 aaPredicted RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 ZNF268Q14587 947 aaPredicted RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 SGSM1Q2NKQ1 1148 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 WDR72Q3MJ13 1102 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 ZC3H14Q6PJT7 736 aaKnown RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 TPRG1Q6ZUI0 275 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 MON1AQ86VX9 555 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 OSTM1Q86WC4 334 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 GRAMD1CQ8IYS0 662 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 CMTM8Q8IZV2 173 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 KIAA1958Q8N8K9 716 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 MYCBPAPQ8TBZ2 947 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 CSGALNACT1Q8TDX6 532 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 GIPC2Q8TF65 315 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 KBTBD7Q8WVZ9 684 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 MRPS31Q92665 395 aaKnown RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 TAF4BQ92750 862 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 NKD2Q969F2 451 aaPredicted RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 MMS19Q96T76 1030 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 PI4K2AQ9BTU6 479 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 SLC46A2Q9BY10 475 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 GTPBP4Q9BZE4 634 aaKnown RBP10.81□□□□□ -0.68
USP3-207ENST00000558218 FOXQ1Q9C009 403 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 KIF9Q9HAQ2 790 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 HEBP1Q9NRV9 189 aa10.81□□□□□ -0.68
USP3-207ENST00000558218 MIA3Q5JRA6 1907 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 CACNA1IQ9P0X4 2223 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 MYBPHLA2RUH7 354 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 PHACTR2O75167 634 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 C4BPAP04003 597 aaKnown RBP10.8□□□□□ -0.68
USP3-207ENST00000558218 ACAT1P24752 427 aaKnown RBP10.8□□□□□ -0.68
USP3-207ENST00000558218 CYP2F1P24903 491 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 LMO2P25791 158 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 AVPR1AP37288 418 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 PDE6CP51160 858 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 TNNC1P63316 161 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 AMPD2Q01433 879 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 DPYDQ12882 1025 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 FZD5Q13467 585 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 GRM2Q14416 872 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 UBXN2BQ14CS0 331 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 LMBRD2Q68DH5 695 aaPredicted RBP10.8□□□□□ -0.68
USP3-207ENST00000558218 SCARA3Q6AZY7 606 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 TMEM150AQ86TG1 271 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 RALGPS2Q86X27 583 aaPredicted RBP10.8□□□□□ -0.68
USP3-207ENST00000558218 GUF1Q8N442 669 aaKnown RBP10.8□□□□□ -0.68
USP3-207ENST00000558218 FSIP1Q8NA03 581 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 FAM3CQ92520 227 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 SYT15Q9BQS2 421 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 FAM126AQ9BYI3 521 aaPredicted RBP10.8□□□□□ -0.68
USP3-207ENST00000558218 GZF1Q9H116 711 aaPredicted RBP10.8□□□□□ -0.68
USP3-207ENST00000558218 XYLT2Q9H1B5 865 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 SNX25Q9H3E2 840 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 FRMD4BQ9Y2L6 1034 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 DENND4CQ5VZ89 1909 aa10.8□□□□□ -0.68
USP3-207ENST00000558218 NUP210Q8TEM1 1887 aaPredicted RBP10.79□□□□□ -0.68
USP3-207ENST00000558218 SHISA7A6NL88 538 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 SLC38A8A6NNN8 435 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 TRIM66O15016 1216 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 LAMTOR5O43504 91 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 GFRA3O60609 400 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 NR3C1P04150 777 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 SP9P0CG40 484 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 P4HA1P13674 534 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 PTPN1P18031 435 aaKnown RBP10.79□□□□□ -0.68
USP3-207ENST00000558218 TARSP26639 723 aaKnown RBP10.79□□□□□ -0.68
USP3-207ENST00000558218 CLCN1P35523 988 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 MYL6P60660 151 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
USP3-207ENST00000558218 DDR2Q16832 855 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms