RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 IL1BP01584 269 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ETV4P43268 484 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 NEK3P51956 506 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF132P52740 706 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 GDF10P55107 478 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 PTK7Q13308 1070 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ARHGEF16Q5VV41 709 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 FAM91A1Q658Y4 838 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 CWF19L1Q69YN2 538 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 OR52E8Q6IFG1 317 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 OXNAD1Q96HP4 312 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 FAM111AQ96PZ2 611 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 IMPG2Q9BZV3 1241 aa12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 SEPT9Q9UHD8 586 aaPredicted RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 XPO7Q9UIA9 1087 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-211ENST00000557658 FCHO1O14526 889 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 CST8O60676 142 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 STBD1O95210 358 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 LDHAP00338 332 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 RARBP10826 455 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 BGNP21810 368 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 PGM1P36871 562 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 NCOA4Q13772 614 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 PPP1R15BQ5SWA1 713 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 SLFN12LQ6IEE8 588 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 BBS12Q6ZW61 710 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 DTX3LQ8TDB6 740 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 WDR60Q8WVS4 1066 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 PRR11Q96HE9 360 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF518BQ9C0D4 1074 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 METTL5Q9NRN9 209 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 SAE1Q9UBE0 346 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 POLIQ9UNA4 740 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 C2CD2Q9Y426 696 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 MAGEA13PA6NCF6 341 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 C3orf70A6NLC5 250 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 TBC1D12O60347 775 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 TMEM63AO94886 807 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 PSAPP07602 524 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 ASNSP08243 561 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 INHBAP08476 426 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 KRT7P08729 469 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 MYL2P10916 166 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 KCNA3P22001 575 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 SLC18A2Q05940 514 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 DLGAP5Q15398 846 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 GALNT15Q8N3T1 639 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 TAB3Q8N5C8 712 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 CCDC110Q8TBZ0 833 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 TRAPPC9Q96Q05 1148 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 C10orf88Q9H8K7 445 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 CPSF2Q9P2I0 782 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 ANGPTL2Q9UKU9 493 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 STRIP2Q9ULQ0 834 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 CHMP2BQ9UQN3 213 aa12.37□□□□□ -0.43
VIPAS39-211ENST00000557658 TCRBV7S3A2A0A539 114 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 RAP1GDS1P52306 607 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF200P98182 395 aaPredicted RBP12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 RNF220Q5VTB9 566 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 SWSAP1Q6NVH7 229 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 UBR7Q8N806 425 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 ZFAND2BQ8WV99 257 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 SLC44A1Q8WWI5 657 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 SERAC1Q96JX3 654 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 MSTO1Q9BUK6 570 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 IQCGQ9H095 443 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 ZWILCHQ9H900 591 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 SLC38A10Q9HBR0 1119 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 CNTNAP1P78357 1384 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 F8W8V4 182 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 KLF11O14901 512 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 MAP3K13O43283 966 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 MAGEC1O60732 1142 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 STAM2O75886 525 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 PSMA2P25787 234 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 PSMC4P43686 418 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 SERPINB4P48594 390 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 FAAP100Q0VG06 881 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 HADHQ16836 314 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 XRRA1Q6P2D8 792 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 TTC7BQ86TV6 843 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 TMPRSS6Q8IU80 811 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 GPRASP2Q96D09 838 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 ZNF184Q99676 751 aaPredicted RBP12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 PPP1R12CQ9BZL4 782 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 WDR35Q9P2L0 1181 aa12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 CTDP1Q9Y5B0 961 aaPredicted RBP12.36□□□□□ -0.43
VIPAS39-211ENST00000557658 B2RBV5 119 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms