RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PPP3CAQ08209 521 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 TDGQ13569 410 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 QPCTQ16769 361 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 CFAP221Q4G0U5 840 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MDH1BQ5I0G3 518 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 TMEM31Q5JXX7 168 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 TTI2Q6NXR4 508 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 VSTM1Q6UX27 236 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 DNAJB7Q7Z6W7 309 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 UNC93AQ86WB7 457 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 OSTM1Q86WC4 334 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 ZC3H3Q8IXZ2 948 aaKnown RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MYCBPAPQ8TBZ2 947 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 TAS1R2Q8TE23 839 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 GIPC2Q8TF65 315 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 KBTBD7Q8WVZ9 684 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 FGF13Q92913 245 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 PSMG2Q969U7 264 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MYLPFQ96A32 169 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MCRS1Q96EZ8 462 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MYADMQ96S97 322 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 RTP3Q9BQQ7 232 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 ELOVL4Q9GZR5 314 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 XYLT2Q9H1B5 865 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 ATXN3LQ9H3M9 355 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 SMYD3Q9H7B4 428 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 CD320Q9NPF0 282 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 CEP72Q9P209 647 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 ZMYM5Q9UJ78 669 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 FBXL21Q9UKT6 434 aa8.87□□□□□ -0.99
PSEN1-223ENST00000557511 MAGED2Q9UNF1 606 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-223ENST00000557511 TCF20Q9UGU0 1960 aaKnown RBP8.86□□□□□ -0.99
PSEN1-223ENST00000557511 MYBPHLA2RUH7 354 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 GFRA3O60609 400 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 SOAT2O75908 522 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 AFPP02771 609 aaKnown RBP8.86□□□□□ -0.99
PSEN1-223ENST00000557511 CD58P19256 250 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 BMP6P22004 513 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 BDNFP23560 247 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 TBXAS1P24557 533 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-223ENST00000557511 CYP2F1P24903 491 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 LMO2P25791 158 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 GABRR2P28476 465 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 ERCC5P28715 1186 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-223ENST00000557511 RAP1GAPP47736 663 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 CDH8P55286 799 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 SLC8A3P57103 927 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 ZXDAP98168 799 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 CCDC183Q5T5S1 534 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 SPOPLQ6IQ16 392 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 FAM171BQ6P995 826 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 LIMS2Q7Z4I7 341 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 LRRTM3Q86VH5 581 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 YAF2Q8IY57 180 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 B3GALNT2Q8NCR0 500 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 ANKRD20A12PQ8NF67 263 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 ITFG1Q8TB96 612 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 ING5Q8WYH8 240 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 MRPS31Q92665 395 aaKnown RBP8.86□□□□□ -0.99
PSEN1-223ENST00000557511 EDAQ92838 391 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 E2F7Q96AV8 911 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 CEP295NLQ96MC4 621 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 NT5C1BQ96P26 610 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
PSEN1-223ENST00000557511 LPIN3Q9BQK8 851 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 NT5C1AQ9BXI3 368 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 FAM124BQ9H5Z6 455 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-223ENST00000557511 KCNK12Q9HB15 430 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 ANO10Q9NW15 660 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 BRWD1Q9NSI6 2320 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 VWA8A3KMH1 1905 aa8.86□□□□□ -0.99
PSEN1-223ENST00000557511 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 A0A1W2PRU2 124 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 CFAP99D6REC4 459 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 PES1O00541 588 aaKnown RBP8.85□□□□□ -0.99
PSEN1-223ENST00000557511 ATP2C2O75185 946 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 ASGR2P07307 311 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 CCNYL3P0C7X3 344 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 DDX6P26196 483 aaKnown RBP eCLIP8.85□□□□□ -0.99
PSEN1-223ENST00000557511 FMO5P49326 533 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 PDE6CP51160 858 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 CDR1P51861 262 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 NDST1P52848 882 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 PFKPQ01813 784 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 SIGLEC14Q08ET2 396 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 KCNH2Q12809 1159 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 DDR2Q16832 855 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 C1orf220Q5T0J3 134 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 GPR158Q5T848 1215 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 DESI1Q6ICB0 168 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 ACOT1Q86TX2 421 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 SLC35C1Q96A29 364 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 PCED1BQ96HM7 432 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 CNOT6LQ96LI5 555 aaKnown RBP8.85□□□□□ -0.99
PSEN1-223ENST00000557511 FAM81BQ96LP2 452 aa8.85□□□□□ -0.99
PSEN1-223ENST00000557511 NAT10Q9H0A0 1025 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms