RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 BICD1Q96G01 975 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 CDK5RAP3Q96JB5 506 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 LOXL4Q96JB6 756 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 MKNK1Q9BUB5 465 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 HAPLN2Q9GZV7 340 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 ASB7Q9H672 318 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 TASP1Q9H6P5 420 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 NDFIP2Q9NV92 336 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 THG1LQ9NWX6 298 aaKnown RBP9.38□□□□□ -0.91
VRK1-206ENST00000557222 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
VRK1-206ENST00000557222 TBX20Q9UMR3 447 aa9.38□□□□□ -0.91
VRK1-206ENST00000557222 MAP1BP46821 2468 aaKnown RBP9.38□□□□□ -0.91
VRK1-206ENST00000557222 TICRRQ7Z2Z1 1910 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 ANO9A1A5B4 782 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 SPECC1L-ADORA2AF8WAN1 911 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 K7ESF4 209 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 RNF225M0QZC1 329 aaPredicted RBP9.37□□□□□ -0.91
VRK1-206ENST00000557222 PIRO00625 290 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 HNRNPDLO14979 420 aaKnown RBP9.37□□□□□ -0.91
VRK1-206ENST00000557222 BNIP3LO60238 219 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 ADRB1P08588 477 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 GJA1P17302 382 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 MAP2K3P46734 347 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 SPEM2Q0P670 501 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 CCINQ13939 588 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 VEPH1Q14D04 833 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 ENOX2Q16206 610 aaKnown RBP9.37□□□□□ -0.91
VRK1-206ENST00000557222 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 ARSHQ5FYA8 562 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 WDR5BQ86VZ2 330 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 ATAD1Q8NBU5 361 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 FAM200AQ8TCP9 573 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 GLMNQ92990 594 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 RSPRY1Q96DX4 576 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 SENP8Q96LD8 212 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 CCSER1Q9C0I3 900 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 ATXN3LQ9H3M9 355 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 PARVGQ9HBI0 331 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 ENAMQ9NRM1 1142 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 SEMA4GQ9NTN9 838 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
VRK1-206ENST00000557222 CPSF3Q9UKF6 684 aaKnown RBP9.37□□□□□ -0.91
VRK1-206ENST00000557222 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
VRK1-206ENST00000557222 C2CD2Q9Y426 696 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 TIMM13Q9Y5L4 95 aaPredicted RBP9.37□□□□□ -0.91
VRK1-206ENST00000557222 SDK1Q7Z5N4 2213 aa9.37□□□□□ -0.91
VRK1-206ENST00000557222 NCANO14594 1321 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 DCDC2BA2VCK2 349 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 ATG13O75143 517 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 AKAP3O75969 853 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 BMP15O95972 392 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 OR4Q2P0C623 313 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 DDX6P26196 483 aaKnown RBP eCLIP9.36□□□□□ -0.91
VRK1-206ENST00000557222 GABRR2P28476 465 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 TNFSF9P41273 254 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 FNTBP49356 437 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 ATP1A2P50993 1020 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 LIMK1P53667 647 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 EPHA4P54764 986 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 CLDN10P78369 228 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 GTF2BQ00403 316 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 AMPD2Q01433 879 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 RAD51AP2Q09MP3 1159 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 ZRSR1Q15695 479 aaKnown RBP9.36□□□□□ -0.91
VRK1-206ENST00000557222 ITPRIPL2Q3MIP1 535 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 GPR158Q5T848 1215 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 C9orf57Q5W0N0 161 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 SLFN12LQ6IEE8 588 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 PRR23CQ6ZRP0 262 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 PRR23BQ6ZRT6 265 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 METTL23Q86XA0 190 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 NT5DC4Q86YG4 428 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 THEM5Q8N1Q8 247 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 TPCN2Q8NHX9 752 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 SPPL2BQ8TCT7 592 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 BPIFB1Q8TDL5 484 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 EXOC4Q96A65 974 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 CALML4Q96GE6 196 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 ABHD17AQ96GS6 310 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 PGLYRP2Q96PD5 576 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 GCNAQ96QF7 691 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 KIF2CQ99661 725 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 MSTO1Q9BUK6 570 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 ZCWPW1Q9H0M4 648 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 ST6GALNAC4Q9H4F1 302 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 ZDHHC3Q9NYG2 299 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 STYXL1Q9Y6J8 313 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 SPAG17Q6Q759 2223 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 RALGAPA1Q6GYQ0 2036 aa9.36□□□□□ -0.91
VRK1-206ENST00000557222 USP24Q9UPU5 2620 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 VWA3AA6NCI4 1184 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 SLC38A8A6NNN8 435 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 TRDMT1O14717 391 aaKnown RBP9.35□□□□□ -0.91
VRK1-206ENST00000557222 FAM13AO94988 1023 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 UBA7P41226 1012 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 MCM2P49736 904 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 SPAG1Q07617 926 aa9.35□□□□□ -0.91
VRK1-206ENST00000557222 TMEM132DQ14C87 1099 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms