RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 FRMD8P1Q9BZ68 369 aaPredicted RBP13.16□□□□□ -0.3
APEX1-216ENST00000557159 VPS37BQ9H9H4 285 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
APEX1-216ENST00000557159 HSPBP1Q9NZL4 362 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 A0A0G2JND7 137 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 BUD23O43709 281 aaKnown RBP13.16□□□□□ -0.3
APEX1-216ENST00000557159 ITGAVP06756 1048 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 ECE1P42892 770 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 NEK3P51956 506 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 GTF2BQ00403 316 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 CDC16Q13042 620 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 CST9Q5W186 159 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 DCAF15Q66K64 600 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 IZUMO2Q6UXV1 221 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 GSTA5Q7RTV2 222 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 SCUBE1Q8IWY4 988 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 APBB2Q92870 758 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 KLRG1Q96E93 195 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 C7orf26Q96N11 449 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 TUBGCP5Q96RT8 1024 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 METTL5Q9NRN9 209 aaKnown RBP13.16□□□□□ -0.3
APEX1-216ENST00000557159 MAP3K20Q9NYL2 800 aaKnown RBP13.16□□□□□ -0.3
APEX1-216ENST00000557159 DCTN4Q9UJW0 460 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 FARP1Q9Y4F1 1045 aaPredicted RBP13.16□□□□□ -0.3
APEX1-216ENST00000557159 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
APEX1-216ENST00000557159 MYPNQ86TC9 1320 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 K7ENM7 598 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 FCHO1O14526 889 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 USP2O75604 605 aaPredicted RBP13.15□□□□□ -0.3
APEX1-216ENST00000557159 CCDC166P0CW27 439 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 PIK3CAP42336 1068 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 RANBP1P43487 201 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 GPX6P59796 221 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 OASLQ15646 514 aaKnown RBP13.15□□□□□ -0.3
APEX1-216ENST00000557159 MAP3K21Q5TCX8 1036 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
APEX1-216ENST00000557159 MON1BQ7L1V2 547 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 USP37Q86T82 979 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 LRRC6Q86X45 466 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 DTX3LQ8TDB6 740 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 NAT14Q8WUY8 206 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 LPAR1Q92633 364 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 SUDS3Q9H7L9 328 aaPredicted RBP13.15□□□□□ -0.3
APEX1-216ENST00000557159 ZNF112Q9UJU3 913 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 STRIP2Q9ULQ0 834 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 FZD1Q9UP38 647 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 SCINQ9Y6U3 715 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 WASF2Q9Y6W5 498 aa13.15□□□□□ -0.3
APEX1-216ENST00000557159 CLUHO75153 1309 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 ARHGEF35A5YM69 484 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 STRNO43815 780 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 CELF2O95319 508 aaKnown RBP13.14□□□□□ -0.31
APEX1-216ENST00000557159 UBTFL6P0CB48 400 aaPredicted RBP13.14□□□□□ -0.31
APEX1-216ENST00000557159 SETSIPP0DME0 302 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 AMPD1P23109 780 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 RGS2P41220 211 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 ARSEP51690 589 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
APEX1-216ENST00000557159 ASPHQ12797 758 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 NFX1Q12986 1120 aaKnown RBP13.14□□□□□ -0.31
APEX1-216ENST00000557159 FASTKD3Q14CZ7 662 aaKnown RBP13.14□□□□□ -0.31
APEX1-216ENST00000557159 TMEM259Q4ZIN3 620 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 SH2D5Q6ZV89 423 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 NCAPG2Q86XI2 1143 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 PDSS2Q86YH6 399 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 ZBED8Q8IZ13 594 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 FBXL13Q8NEE6 735 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 ACER1Q8TDN7 264 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 DCAKDQ8WVC6 231 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 SEMA4DQ92854 862 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 APOPT1Q96IL0 206 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 MAML3Q96JK9 1138 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 PAFAH2Q99487 392 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 PTTG2Q9NZH5 202 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 TAGLN3Q9UI15 199 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 PCDHB2Q9Y5E7 798 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
APEX1-216ENST00000557159 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 DENND3A2RUS2 1198 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 TTC36A6NLP5 189 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 TMCC1O94876 653 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 CFBP00751 764 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 HOXA13P31271 388 aaPredicted RBP13.13□□□□□ -0.31
APEX1-216ENST00000557159 ARL4CP56559 192 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 PDIA2Q13087 525 aaKnown RBP13.13□□□□□ -0.31
APEX1-216ENST00000557159 MYBPC3Q14896 1274 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 HIF1AQ16665 826 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 PLEKHA7Q6IQ23 1121 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 RIPOR1Q6ZS17 1223 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 MCF2L2Q86YR7 1114 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 HIC2Q96JB3 615 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 FAM161BQ96MY7 647 aa13.13□□□□□ -0.31
APEX1-216ENST00000557159 BTBD9Q96Q07 612 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms