RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DUSP4Q13115 394 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 TARDBPQ13148 414 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 TBC1D25Q3MII6 688 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 C4orf48Q5BLP8 95 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 WWC2Q6AWC2 1192 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 CWC27Q6UX04 472 aaKnown RBP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 TXNDC5Q8NBS9 432 aaKnown RBP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 BEST2Q8NFU1 509 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 CRYGNQ8WXF5 182 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF592Q92610 1267 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 LPIN3Q9BQK8 851 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 MTA3Q9BTC8 594 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 NFKBIZQ9BYH8 718 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 SMG9Q9H0W8 520 aaKnown RBP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 CPNE5Q9HCH3 593 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 C6orf50Q9HD87 102 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 DIAPH3Q9NSV4 1193 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 SLC38A7Q9NVC3 462 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 DUS2Q9NX74 493 aaKnown RBP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
ATXN3-245ENST00000556958 NFE2L3Q9Y4A8 694 aa6.28□□□□□ -1.4
ATXN3-245ENST00000556958 ESYT2A0FGR8 921 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 FIGNL2A6NMB9 653 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 N4BP3O15049 544 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 MSH4O15457 936 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 B4GALT5O43286 388 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 SUV39H1O43463 412 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 BRINP1O60477 761 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 RECQL4O94761 1208 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 RPL9P32969 192 aaKnown RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 QARSP47897 775 aaKnown RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 TUFMP49411 452 aaKnown RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 PDE1AP54750 535 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 PCBP4P57723 403 aaKnown RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 MCCD1P59942 119 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 CYP4F8P98187 520 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 MBTD1Q05BQ5 628 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 NR5A1Q13285 461 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 ZNF268Q14587 947 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 ARID5BQ14865 1188 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 SF3A1Q15459 793 aaKnown RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 HLA-BQ31612 363 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 PLA2G4FQ68DD2 849 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 NAIF1Q69YI7 327 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 CASC1Q6TDU7 716 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 CD300LGQ6UXG3 332 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 SV2AQ7L0J3 742 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 TRMT11Q7Z4G4 463 aaKnown RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 APBB1IPQ7Z5R6 666 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 CDR2LQ86X02 465 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 ERICH1Q86X53 443 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 SLC41A1Q8IVJ1 513 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 LSMEM2Q8N112 164 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 CACTIN-AS1Q8N1I8 211 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 ALLCQ8N6M5 410 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 IL17RCQ8NAC3 791 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 FANCBQ8NB91 859 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 OSCP1Q8WVF1 389 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 SLC5A5Q92911 643 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 USP13Q92995 863 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 PRIMPOLQ96LW4 560 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 ZNF578Q96N58 590 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 DPH1Q9BZG8 443 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 DNAJC25Q9H1X3 360 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 IL21RQ9HBE5 538 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 PRMT7Q9NVM4 692 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-245ENST00000556958 BARHL2Q9NY43 387 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 HSFX1Q9UBD0 423 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 FTSJ1Q9UET6 329 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 MAN2B2Q9Y2E5 1009 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 AHCTF1Q8WYP5 2266 aa6.27□□□□□ -1.41
ATXN3-245ENST00000556958 ITPR3Q14573 2671 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 IGHV1OR15-9A0A0B4J2B8 117 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 OR6C75A6NL08 312 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 SGK1O00141 431 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 PODXLO00592 558 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 PSMD10O75832 226 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 NFATC1O95644 943 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 P4HBP07237 508 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 HNRNPLP14866 589 aaKnown RBP eCLIP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 IGFBP6P24592 240 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 ELAVL4P26378 380 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 GRM5P41594 1212 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 TNFRSF4P43489 277 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 YWHAHQ04917 246 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 SRSF11Q05519 484 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 MYO1EQ12965 1108 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 GPR17Q13304 367 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 MTF1Q14872 753 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 EMC2Q15006 297 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 KRTAP21-3Q3LHN1 58 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 PPP4R3AQ6IN85 833 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 CENPPQ6IPU0 288 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 SYNE3Q6ZMZ3 975 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 TMTC3Q6ZXV5 915 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 DHX40Q8IX18 779 aaKnown RBP6.26□□□□□ -1.41
ATXN3-245ENST00000556958 FAM26EQ8N5C1 309 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 MAB21L3Q8N8X9 362 aa6.26□□□□□ -1.41
ATXN3-245ENST00000556958 EXOC6Q8TAG9 804 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms