RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 SCGB1D2O95969 90 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 C1SP09871 688 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 RPS6KB1P23443 525 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 AKAP5P24588 427 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 ZNF280AP59817 542 aaPredicted RBP7.57□□□□□ -1.2
LINC00871-204ENST00000556886 CTXN1P60606 82 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 IFIT5Q13325 482 aaKnown RBP7.57□□□□□ -1.2
LINC00871-204ENST00000556886 PARP10Q53GL7 1025 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 SYAP1Q96A49 352 aaPredicted RBP7.57□□□□□ -1.2
LINC00871-204ENST00000556886 JAKMIP1Q96N16 626 aaKnown RBP7.57□□□□□ -1.2
LINC00871-204ENST00000556886 GRPEL1Q9HAV7 217 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 PAG1Q9NWQ8 432 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 PNMA8BQ9ULN7 279 aaPredicted RBP7.57□□□□□ -1.2
LINC00871-204ENST00000556886 SORCS3Q9UPU3 1222 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 SLIT2O94813 1529 aa7.57□□□□□ -1.2
LINC00871-204ENST00000556886 ANKRD36CQ5JPF3 1778 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 A0A1B0GUL7 405 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 ANKRD18BA2A2Z9 1011 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 RNF113AO15541 343 aaKnown RBP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 FAM20BO75063 409 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 IFIT1P09914 478 aaKnown RBP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 XRCC6P12956 609 aaKnown RBP eCLIP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 MGAT1P26572 445 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 NHLH2Q02577 135 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 TLE1Q04724 770 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 RAB39AQ14964 217 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 PPP2R5AQ15172 486 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 RABL3Q5HYI8 236 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 ZSCAN25Q6NSZ9 544 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 TTC7BQ86TV6 843 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 ZNF34Q8IZ26 560 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 FBXL16Q8N461 479 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 NEUROD6Q96NK8 337 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 VRK1Q99986 396 aaPredicted RBP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 C11orf54Q9H0W9 315 aaPredicted RBP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 ZNF703Q9H7S9 590 aaPredicted RBP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 FBXO34Q9NWN3 711 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 EIF2B4Q9UI10 523 aaKnown RBP7.56□□□□□ -1.2
LINC00871-204ENST00000556886 CTNNA3Q9UI47 895 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 ZNF831Q5JPB2 1677 aa7.56□□□□□ -1.2
LINC00871-204ENST00000556886 NRAPQ86VF7 1730 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 SPATA31A5Q5VU36 1347 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 SPATA31A7Q8IWB4 1347 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 TCRBV7S2A1N4TA0A589 114 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 LRRC14BA6NHZ5 514 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 DRGXA6NNA5 263 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 STX6O43752 255 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 RFPL1O75677 317 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 POMCP01189 267 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 RPLP2P05387 115 aaKnown RBP7.55□□□□□ -1.2
LINC00871-204ENST00000556886 UQCRFS1P1P0C7P4 283 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 CHN2P52757 468 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 TIMM10P62072 90 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 DGCR2P98153 550 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 PKP1Q13835 747 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 ZNF267Q14586 743 aaPredicted RBP7.55□□□□□ -1.2
LINC00871-204ENST00000556886 PGS1Q32NB8 556 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 ADCK5Q3MIX3 580 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 LRRC24Q50LG9 513 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 DACT2Q5SW24 774 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 IFIT1BQ5T764 474 aaKnown RBP7.55□□□□□ -1.2
LINC00871-204ENST00000556886 ZNF772Q68DY9 489 aaPredicted RBP7.55□□□□□ -1.2
LINC00871-204ENST00000556886 GADL1Q6ZQY3 521 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 CPT1CQ8TCG5 803 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 PLEKHG4BQ96PX9 1271 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 NEK1Q96PY6 1258 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 NEU1Q99519 415 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 LLPHQ9BRT6 129 aaKnown RBP7.55□□□□□ -1.2
LINC00871-204ENST00000556886 PARPBPQ9NWS1 579 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 MYRFQ9Y2G1 1151 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 RIPOR2Q9Y4F9 1068 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 RTL9Q8NET4 1388 aa7.55□□□□□ -1.2
LINC00871-204ENST00000556886 RREB1Q92766 1687 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 KIAA0391O15091 583 aaKnown RBP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 SCAF4O95104 1147 aaKnown RBP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 LETM1O95202 739 aaPredicted RBP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 SBK3P0C264 359 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 SYT1P21579 422 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 SLC6A2P23975 617 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 CYP2C19P33261 490 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 RNASE9P60153 205 aaKnown RBP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 SLC25A3Q00325 362 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 CREMQ03060 361 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 PUM1Q14671 1186 aaKnown RBP eCLIP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 UBXN2BQ14CS0 331 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 ZXDCQ2QGD7 858 aaPredicted RBP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 KHDC1Q4VXA5 237 aaKnown RBP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 GORABQ5T7V8 394 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 METRNLQ641Q3 311 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 CLEC4GQ6UXB4 293 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 MED25Q71SY5 747 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 FAM43AQ8N2R8 423 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
LINC00871-204ENST00000556886 HPS3Q969F9 1004 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 MVB12AQ96EY5 273 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 LRGUKQ96M69 825 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 AGXT2Q9BYV1 514 aa7.54□□□□□ -1.2
LINC00871-204ENST00000556886 CALCOCO1Q9P1Z2 691 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms