RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 PPP1R3BQ86XI6 285 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 KIAA1191Q96A73 305 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 PTCD3Q96EY7 689 aaKnown RBP5.17□□□□□ -1.58
PRPF39-210ENST00000556718 MSLNLQ96KJ4 702 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 MRI1Q9BV20 369 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 BRIP1Q9BX63 1249 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 PACSIN1Q9BY11 444 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.17□□□□□ -1.58
PRPF39-210ENST00000556718 SLAMF7Q9NQ25 335 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 KCTD5Q9NXV2 234 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 LUZP4Q9P127 313 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 CFAP97Q9P2B7 532 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 CPNE7Q9UBL6 633 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 KCNE5Q9UJ90 142 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 CDC23Q9UJX2 597 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 RUVBL1Q9Y265 456 aaKnown RBP5.17□□□□□ -1.58
PRPF39-210ENST00000556718 ACTL7AQ9Y615 435 aa5.17□□□□□ -1.58
PRPF39-210ENST00000556718 NT5C1B-RDH14C9J2C7 533 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 PIP5K1CO60331 668 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 FGF18O76093 207 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 GPANK1O95872 356 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 PCSK1P29120 753 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 CHKAP35790 457 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 GRK6P43250 576 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 RAB32Q13637 225 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 BLMHQ13867 455 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 ARL13BQ3SXY8 428 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 HIBCHQ6NVY1 386 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-210ENST00000556718 BEND5Q7L4P6 421 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 SESTD1Q86VW0 696 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 FAM90A1Q86YD7 464 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF366Q8N895 744 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-210ENST00000556718 ATP11CQ8NB49 1132 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 NLGN4YQ8NFZ3 816 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-210ENST00000556718 IPCEF1Q8WWN9 437 aaPredicted RBP5.16□□□□□ -1.58
PRPF39-210ENST00000556718 DDB2Q92466 427 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 ZNF566Q969W8 418 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 EVI5LQ96CN4 794 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 IQCDQ96DY2 449 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 TMEM41AQ96HV5 264 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 MRGPRX1Q96LB2 322 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 EIF2AQ9BY44 585 aaKnown RBP5.16□□□□□ -1.58
PRPF39-210ENST00000556718 REXO4Q9GZR2 422 aaKnown RBP5.16□□□□□ -1.58
PRPF39-210ENST00000556718 GTF2A1LQ9UNN4 478 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 PCDHGB2Q9Y5G2 931 aa5.16□□□□□ -1.58
PRPF39-210ENST00000556718 A0A087WV62 115 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 WDR91A4D1P6 747 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 BTN3A1O00481 513 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 THAP12O43422 761 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 AHSGP02765 367 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 THP07101 528 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 ALAS1P13196 640 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 ATP5JP18859 108 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 IL6STP40189 918 aaPredicted RBP5.15□□□□□ -1.59
PRPF39-210ENST00000556718 VAV2P52735 878 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 EXOSC9Q06265 439 aaKnown RBP5.15□□□□□ -1.59
PRPF39-210ENST00000556718 PMS2P11Q13670 270 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 GEN1Q17RS7 908 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 CCDC38Q502W7 563 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 AKNAD1Q5T1N1 836 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 CCDC174Q6PII3 467 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 TXLNBQ8N3L3 684 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 NKAPQ8N5F7 415 aaKnown RBP5.15□□□□□ -1.59
PRPF39-210ENST00000556718 ZNF527Q8NB42 609 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 NMD3Q96D46 503 aaKnown RBP5.15□□□□□ -1.59
PRPF39-210ENST00000556718 P2RX7Q99572 595 aaKnown RBP5.15□□□□□ -1.59
PRPF39-210ENST00000556718 C1orf43Q9BWL3 253 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 TRIM54Q9BYV2 358 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 BRD9Q9H8M2 597 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.15□□□□□ -1.59
PRPF39-210ENST00000556718 RLIMQ9NVW2 624 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 FBXO34Q9NWN3 711 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 ANAPC4Q9UJX5 808 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 MED16Q9Y2X0 877 aa5.15□□□□□ -1.59
PRPF39-210ENST00000556718 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.15□□□□□ -1.59
PRPF39-210ENST00000556718 MYO1CO00159 1063 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 KIAA0391O15091 583 aaKnown RBP5.14□□□□□ -1.59
PRPF39-210ENST00000556718 GRM6O15303 877 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 FFAR2O15552 330 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 SKAP2O75563 359 aaPredicted RBP5.14□□□□□ -1.59
PRPF39-210ENST00000556718 FPR1P21462 350 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 ALDH1A3P47895 512 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 NOMO3P69849 1222 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 SLC13A2Q13183 592 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 UBXN2BQ14CS0 331 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 ALFQ53S48 1182 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 CCDC93Q567U6 631 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 C3orf38Q5JPI3 329 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 OTUD7BQ6GQQ9 843 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 CCDC70Q6NSX1 233 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 SDR16C5Q8N3Y7 309 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 LNX2Q8N448 690 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 CELF5Q8N6W0 485 aaKnown RBP5.14□□□□□ -1.59
PRPF39-210ENST00000556718 FANCBQ8NB91 859 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 IL17RDQ8NFM7 739 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 SSH3Q8TE77 659 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 DPF1Q92782 380 aa5.14□□□□□ -1.59
PRPF39-210ENST00000556718 DDX17Q92841 729 aaKnown RBP5.14□□□□□ -1.59
PRPF39-210ENST00000556718 UROC1Q96N76 676 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms