RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 ZNF653Q96CK0 615 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 PCED1BQ96HM7 432 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 CEP295NLQ96MC4 621 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 RTP3Q9BQQ7 232 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 B3GNT5Q9BYG0 378 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 LRRC4Q9HBW1 653 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 ST7Q9NRC1 585 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 EHD2Q9NZN4 543 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 HSFX1Q9UBD0 423 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 MTRRQ9UBK8 725 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 DPP7Q9UHL4 492 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 ALPK3Q96L96 1907 aa9.74□□□□□ -0.85
ACTN1-218ENST00000556343 A0A0A6YYK5 440 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 LCHNA4D1U4 455 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ESPNB1AK53 854 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 C2CD2LO14523 706 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 SART1O43290 800 aaKnown RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 TBC1D4O60343 1298 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 CALCAP01258 141 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ADH1AP07327 375 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 CA3P07451 260 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ABCB4P21439 1286 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 MMP8P22894 467 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 BDNFP23560 247 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 MAGEA11P43364 429 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 PLA2G4AP47712 749 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 NDUFV1P49821 464 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 MAP3K7CLP57077 242 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ERVK-21P61565 698 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 MLLT1Q03111 559 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 PDE4CQ08493 712 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 PDCLQ13371 301 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 CFAP221Q4G0U5 840 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 PKDCCQ504Y2 493 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 SLC8B1Q6J4K2 584 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 PRSS55Q6UWB4 352 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 FAM35AQ86V20 835 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 FUKQ8N0W3 1084 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 OR10T2Q8NGX3 314 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 BCL7CQ8WUZ0 217 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 SLC35F5Q8WV83 523 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 KCTD13Q8WZ19 329 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 GOLGA1Q92805 767 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ALS2CR12Q96Q35 445 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ZSWIM1Q9BR11 485 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 TRIM62Q9BVG3 475 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 SELENOOQ9BVL4 669 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 LMAN2LQ9H0V9 348 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ZBP1Q9H171 429 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 SLC28A3Q9HAS3 691 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 PNPLA8Q9NP80 782 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 DMAP1Q9NPF5 467 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 AVENQ9NQS1 362 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ENTPD7Q9NQZ7 604 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 KRT82Q9NSB4 513 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 PARVAQ9NVD7 372 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 COMMD8Q9NX08 183 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 ABI2Q9NYB9 513 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 CTTNBP2NLQ9P2B4 639 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 UVRAGQ9P2Y5 699 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 MYO1AQ9UBC5 1043 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 CNOT8Q9UFF9 292 aaKnown RBP9.73□□□□□ -0.85
ACTN1-218ENST00000556343 NENFQ9UMX5 172 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 CDY1Q9Y6F8 540 aa9.73□□□□□ -0.85
ACTN1-218ENST00000556343 GRXCR1A8MXD5 290 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 H3BNC9 293 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 CLDN5O00501 218 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 ZNF263O14978 683 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 HCRTO43612 131 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 FBXO21O94952 628 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 C1RP00736 705 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 KLRC2P26717 231 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 SSTR3P32745 418 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-218ENST00000556343 OR1D2P34982 312 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 ALDH1A3P47895 512 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 SMAD3P84022 425 aaKnown RBP9.72□□□□□ -0.85
ACTN1-218ENST00000556343 PLD1Q13393 1074 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 GPM6BQ13491 265 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 RAB33AQ14088 237 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 PTPN14Q15678 1187 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 TAF12Q16514 161 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 PTPROQ16827 1216 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 MGAT5BQ3V5L5 792 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 PPP2R2DQ66LE6 453 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 OR6B2Q6IFH4 312 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 DNAJC24Q6P3W2 148 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 DCUN1D2Q6PH85 259 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 MMS22LQ6ZRQ5 1243 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 TMEM110Q86TL2 294 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 LRRTM3Q86VH5 581 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 TTC30AQ86WT1 665 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 SCN4BQ8IWT1 228 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 REXO1L1PQ8IX06 675 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 SYCE1Q8N0S2 351 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 SIX6OS1Q8N1H7 587 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 WDTC1Q8N5D0 677 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 ZNF461Q8TAF7 563 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 SPPL3Q8TCT6 385 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 POF1BQ8WVV4 589 aa9.72□□□□□ -0.85
ACTN1-218ENST00000556343 RFFLQ8WZ73 363 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms