RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ST13P5Q8NFI4 369 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 ZSCAN18Q8TBC5 510 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 GPR152Q8TDT2 470 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 NELFBQ8WX92 580 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 SMARCD2Q92925 531 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 ELSPBP1Q96BH3 223 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 TRMT2BQ96GJ1 504 aaKnown RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 PCED1BQ96HM7 432 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 CEP295NLQ96MC4 621 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 CEP63Q96MT8 703 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 RPP25Q9BUL9 199 aaKnown RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 SDCBP2Q9H190 292 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 DPEP3Q9H4B8 488 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 SLITRK6Q9H5Y7 841 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 MMRN2Q9H8L6 949 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 IL21Q9HBE4 155 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 KIAA1468Q9P260 1216 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 MAGEC2Q9UBF1 373 aaPredicted RBP12.3□□□□□ -0.44
SLIRP-205ENST00000556310 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 FBXL21Q9UKT6 434 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 CTNND2Q9UQB3 1225 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 ANAPC1Q9H1A4 1944 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 MYH10P35580 1976 aa12.3□□□□□ -0.44
SLIRP-205ENST00000556310 NOL4O94818 638 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 PDGFBP01127 241 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 CFHP08603 1231 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 CDH8P55286 799 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 PAK1Q13153 545 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 CAMK4Q16566 473 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 DDR2Q16832 855 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ARHGAP15Q53QZ3 475 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 STXBP5Q5T5C0 1151 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 SDHAF4Q5VUM1 108 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 TCERG1LQ5VWI1 586 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 TANGO2Q6ICL3 276 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 SPOPLQ6IQ16 392 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 SCN4BQ8IWT1 228 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 CCDC150Q8NCX0 1101 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 FBXL13Q8NEE6 735 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ELMO3Q96BJ8 720 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 TNIP3Q96KP6 325 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ZSWIM3Q96MP5 696 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 IPO9Q96P70 1041 aaKnown RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 GBP4Q96PP9 640 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 DUSP9Q99956 384 aaKnown RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 BCO2Q9BYV7 579 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ELOVL4Q9GZR5 314 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ATXN3LQ9H3M9 355 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 CLSTN2Q9H4D0 955 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 METTL14Q9HCE5 456 aaKnown RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ZFP14Q9HCL3 533 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 UXTQ9UBK9 157 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ARMCX3Q9UH62 379 aaPredicted RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ZMYM5Q9UJ78 669 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 ATP8B3O60423 1300 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 HELZP42694 1942 aaKnown RBP12.29□□□□□ -0.44
SLIRP-205ENST00000556310 TICRRQ7Z2Z1 1910 aa12.29□□□□□ -0.44
SLIRP-205ENST00000556310 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 TRIM66O15016 1216 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 FECHP22830 423 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 BDNFP23560 247 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 ANXA13P27216 316 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 NLRP12P59046 1061 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 GPC5P78333 572 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 CYP4F8P98187 520 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 PFKPQ01813 784 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 INCA1Q0VD86 236 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 GPR158Q5T848 1215 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 FRMD5Q7Z6J6 570 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 FILIP1Q7Z7B0 1213 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 TMEM150AQ86TG1 271 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 UNC93AQ86WB7 457 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 SIX5Q8N196 739 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 STKLD1Q8NE28 680 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 DEPDC1BQ8WUY9 529 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 SLC35C1Q96A29 364 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 E2F7Q96AV8 911 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 FAXDC2Q96IV6 333 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 SPATA17Q96L03 361 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 MYRFLQ96LU7 910 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 ZNF518BQ9C0D4 1074 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 MFSD1Q9H3U5 465 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 TASP1Q9H6P5 420 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 CYP3A43Q9HB55 503 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 APOBEC3GQ9HC16 384 aaKnown RBP12.28□□□□□ -0.44
SLIRP-205ENST00000556310 ARHGEF3Q9NR81 526 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 MIA3Q5JRA6 1907 aa12.28□□□□□ -0.44
SLIRP-205ENST00000556310 WDFY4Q6ZS81 3184 aa12.27□□□□□ -0.44
SLIRP-205ENST00000556310 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 F8VP50 259 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 TADA3O75528 432 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 F11P03951 625 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
SLIRP-205ENST00000556310 DDX6P26196 483 aaKnown RBP eCLIP12.27□□□□□ -0.45
SLIRP-205ENST00000556310 WEE1P30291 646 aa12.27□□□□□ -0.45
SLIRP-205ENST00000556310 GRIK1P39086 918 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms