RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 CCNE1P24864 410 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 KPNA1P52294 538 aaPredicted RBP13.46□□□□□ -0.25
SNX6-207ENST00000556303 NRLP54845 237 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 NUCB2P80303 420 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 AMPD2Q01433 879 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 DPYDQ12882 1025 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 LRRC32Q14392 662 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 SGSM1Q2NKQ1 1148 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 DGKKQ5KSL6 1271 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 KRBA2Q6ZNG9 492 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 MAB21L3Q8N8X9 362 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 TAF4BQ92750 862 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 NELL1Q92832 810 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 C8orf48Q96LL4 319 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 FAM83CQ9BQN1 747 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 MAGED2Q9UNF1 606 aaPredicted RBP13.46□□□□□ -0.25
SNX6-207ENST00000556303 GPR179Q6PRD1 2367 aa13.46□□□□□ -0.25
SNX6-207ENST00000556303 LRRIQ3A6PVS8 624 aaPredicted RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 ZNF202O95125 648 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 CHRNB1P11230 501 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 TCF3P15923 654 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 PTPN1P18031 435 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 BDNFP23560 247 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 RPL13P26373 211 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 ANXA13P27216 316 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 GRIK1P39086 918 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 GPR15P49685 360 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 CCR3P51677 355 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 MCCD1P59942 119 aaPredicted RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 MYL6P60660 151 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 FAM160A1Q05DH4 1040 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 BIRC3Q13489 604 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 NCOA4Q13772 614 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 ITPRIPL2Q3MIP1 535 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 ZACNQ401N2 412 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 TDRD10Q5VZ19 366 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 TXNDC8Q6A555 127 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 DENND5BQ6ZUT9 1274 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 SCN4BQ8IWT1 228 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 GUF1Q8N442 669 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 EXOC4Q96A65 974 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 TNIP3Q96KP6 325 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 MRPL45Q9BRJ2 306 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 TTLL2Q9BWV7 592 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 GTPBP4Q9BZE4 634 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 ELOVL4Q9GZR5 314 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 LMAN1LQ9HAT1 526 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 ZSCAN32Q9NX65 697 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 NDRG2Q9UN36 371 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 ZNF638Q14966 1978 aaKnown RBP13.45□□□□□ -0.26
SNX6-207ENST00000556303 TICRRQ7Z2Z1 1910 aa13.45□□□□□ -0.26
SNX6-207ENST00000556303 COL4A2P08572 1712 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 A8MXQ7 604 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 SPECC1L-ADORA2AF8WAN1 911 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
SNX6-207ENST00000556303 ABCB7O75027 752 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 ATP2C2O75185 946 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 PAPSS2O95340 614 aaPredicted RBP13.44□□□□□ -0.26
SNX6-207ENST00000556303 USP17L7P0C7H9 530 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 CTHP32929 405 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 PSMC1P62191 440 aaKnown RBP13.44□□□□□ -0.26
SNX6-207ENST00000556303 CYP27A1Q02318 531 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 CSTF1Q05048 431 aaKnown RBP13.44□□□□□ -0.26
SNX6-207ENST00000556303 MTAPQ13126 283 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 PDGFRLQ15198 375 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 ZNF699Q32M78 642 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 ZNF667Q5HYK9 610 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 SDHAF4Q5VUM1 108 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 CC2D1AQ6P1N0 951 aaPredicted RBP13.44□□□□□ -0.26
SNX6-207ENST00000556303 INTS8Q75QN2 995 aaKnown RBP13.44□□□□□ -0.26
SNX6-207ENST00000556303 SPEM1Q8N4L4 309 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 ZBTB44Q8NCP5 570 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 B3GALNT2Q8NCR0 500 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 PLEKHO2Q8TD55 490 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 ATRIPQ8WXE1 791 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 NXF1Q9UBU9 619 aaKnown RBP13.44□□□□□ -0.26
SNX6-207ENST00000556303 DMXL1Q9Y485 3027 aa13.44□□□□□ -0.26
SNX6-207ENST00000556303 ATP8B3O60423 1300 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 HCRTO43612 131 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 LILRB5O75023 590 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 TADA3O75528 432 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 TRIM21P19474 475 aaKnown RBP13.43□□□□□ -0.26
SNX6-207ENST00000556303 CASP4P49662 377 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 CDR1P51861 262 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 RUNX3Q13761 415 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 MDH1BQ5I0G3 518 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 CEP135Q66GS9 1140 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 SV2AQ7L0J3 742 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 UNC93AQ86WB7 457 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 OVCA2Q8WZ82 227 aa13.43□□□□□ -0.26
SNX6-207ENST00000556303 FAXDC2Q96IV6 333 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms