RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 AKAP3O75969 853 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 P4HA1P13674 534 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 NBL1P41271 181 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 MAGEA9P43362 315 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 KPNA1P52294 538 aaPredicted RBP19.63■□□□□ 0.73
NEDD1-208ENST00000555806 CDH8P55286 799 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 FAM160A1Q05DH4 1040 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 ADAM9Q13443 819 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 ZACNQ401N2 412 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 INTS8Q75QN2 995 aaKnown RBP19.63■□□□□ 0.73
NEDD1-208ENST00000555806 SV2AQ7L0J3 742 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 B3GALNT2Q8NCR0 500 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 FAM3CQ92520 227 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 MYRFLQ96LU7 910 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 THG1LQ9NWX6 298 aaKnown RBP19.63■□□□□ 0.73
NEDD1-208ENST00000555806 DENND4CQ5VZ89 1909 aa19.63■□□□□ 0.73
NEDD1-208ENST00000555806 SHISA7A6NL88 538 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 IKBKBO14920 756 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 GFRA3O60609 400 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 SMC2O95347 1197 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 TRIM49P0CI25 452 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 TRIM49CP0CI26 452 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 PSMC2P35998 433 aaKnown RBP19.62■□□□□ 0.73
NEDD1-208ENST00000555806 PLCB2Q00722 1185 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 SGSM1Q2NKQ1 1148 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 MON1AQ86VX9 555 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 TTC8Q8TAM2 541 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 SPATA17Q96L03 361 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 ELOVL4Q9GZR5 314 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 MMRN2Q9H8L6 949 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 HOOK1Q9UJC3 728 aaKnown RBP19.62■□□□□ 0.73
NEDD1-208ENST00000555806 CCL26Q9Y258 94 aa19.62■□□□□ 0.73
NEDD1-208ENST00000555806 PTPRDP23468 1912 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 ATP8B3O60423 1300 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 SOBPA7XYQ1 873 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 F8VP50 259 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 LAMTOR5O43504 91 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 HLA-DRAP01903 254 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 CCNE1P24864 410 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 SOX9P48436 509 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 C1orf220Q5T0J3 134 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 DENND5BQ6ZUT9 1274 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 ENGASEQ8NFI3 743 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 TAF4BQ92750 862 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 USP13Q92995 863 aaPredicted RBP19.61■□□□□ 0.73
NEDD1-208ENST00000555806 CLDN23Q96B33 292 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 MSANTD3Q96H12 275 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 CEP295NLQ96MC4 621 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 IMPG2Q9BZV3 1241 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 ZNF518BQ9C0D4 1074 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 SDCBP2Q9H190 292 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 C8orf33Q9H7E9 229 aaPredicted RBP19.61■□□□□ 0.73
NEDD1-208ENST00000555806 KIF9Q9HAQ2 790 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.61■□□□□ 0.73
NEDD1-208ENST00000555806 TDP1Q9NUW8 608 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 GTSE1Q9NYZ3 720 aa19.61■□□□□ 0.73
NEDD1-208ENST00000555806 ZNF638Q14966 1978 aaKnown RBP19.61■□□□□ 0.73
NEDD1-208ENST00000555806 TRAV19A0A0A6YYK7 116 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 PROB1E7EW31 1015 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 CLDN5O00501 218 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 CKMP06732 381 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 GCLMP48507 274 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 EDRF1Q3B7T1 1238 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 ZCWPW2Q504Y3 356 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 SPOPLQ6IQ16 392 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 TTC16Q8NEE8 873 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 ERCC4Q92889 916 aaPredicted RBP19.6■□□□□ 0.73
NEDD1-208ENST00000555806 SMARCE1Q969G3 411 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 TNIP3Q96KP6 325 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 C8orf48Q96LL4 319 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 GSDMAQ96QA5 445 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 MED10Q9BTT4 135 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 B3GNT5Q9BYG0 378 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 EHD2Q9NZN4 543 aa19.6■□□□□ 0.73
NEDD1-208ENST00000555806 ASS1P00966 412 aaKnown RBP19.59■□□□□ 0.73
NEDD1-208ENST00000555806 USP17L7P0C7H9 530 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 SP9P0CG40 484 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 PRCPP42785 496 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 RPS9P46781 194 aaKnown RBP19.59■□□□□ 0.73
NEDD1-208ENST00000555806 MLLT6P55198 1093 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-208ENST00000555806 USP46P62068 366 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 TNK2Q07912 1038 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 IFRD2Q12894 506 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-208ENST00000555806 ZNF658Q5TYW1 1059 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-208ENST00000555806 CC2D1AQ6P1N0 951 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-208ENST00000555806 C1orf228Q6PIY5 440 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 NKD2Q969F2 451 aaPredicted RBP19.59■□□□□ 0.73
NEDD1-208ENST00000555806 EEF2KMTQ96G04 330 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 TIGD1Q96MW7 591 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 TSG101Q99816 390 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 TRPM5Q9NZQ8 1165 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 PCDHA5Q9Y5H7 936 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 PATJQ8NI35 1801 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 GREB1Q4ZG55 1949 aa19.59■□□□□ 0.73
NEDD1-208ENST00000555806 SPECC1L-ADORA2AF8WAN1 911 aa19.58■□□□□ 0.72
NEDD1-208ENST00000555806 CETN3O15182 167 aa19.58■□□□□ 0.72
NEDD1-208ENST00000555806 EPB41P11171 864 aaKnown RBP19.58■□□□□ 0.72
NEDD1-208ENST00000555806 CTHP32929 405 aa19.58■□□□□ 0.72
NEDD1-208ENST00000555806 CACNA2D1P54289 1103 aa19.58■□□□□ 0.72
NEDD1-208ENST00000555806 NOP14P78316 857 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms