RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PDE11AQ9HCR9 933 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 TMEM9BQ9NQ34 198 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 RBAKQ9NYW8 714 aaPredicted RBP11.63□□□□□ -0.55
TDP1-212ENST00000555565 KLK13Q9UKR3 277 aa11.63□□□□□ -0.55
TDP1-212ENST00000555565 DENND4CQ5VZ89 1909 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 ABCA7Q8IZY2 2146 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 NUP210Q8TEM1 1887 aaPredicted RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 DPYSL4O14531 572 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 KHNYNO15037 678 aaKnown RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 GABRR2P28476 465 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 PNPLA4P41247 253 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 GALK1P51570 392 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 SMARCB1Q12824 385 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 RUNX3Q13761 415 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 ELF2Q15723 593 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 MGAT5BQ3V5L5 792 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 FOXD4L5Q5VV16 416 aaPredicted RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 PMS2CLQ68D20 193 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 TRIM68Q6AZZ1 485 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 KIAA1211LQ6NV74 962 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 SHC4Q6S5L8 630 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 SYT13Q7L8C5 426 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 SPPL2BQ8TCT7 592 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 CACTINQ8WUQ7 758 aaKnown RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 FOXD4L4Q8WXT5 416 aaPredicted RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 HPS3Q969F9 1004 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 ZNF560Q96MR9 790 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 ZNF396Q96N95 335 aaPredicted RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 TRIM9Q9C026 710 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 TNMDQ9H2S6 317 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 TASP1Q9H6P5 420 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 TMEM206Q9H813 350 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 TMLHEQ9NVH6 421 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 ABI2Q9NYB9 513 aaPredicted RBP11.62□□□□□ -0.55
TDP1-212ENST00000555565 L1RE1Q9UN81 338 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 AGAP1Q9UPQ3 857 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 CCL26Q9Y258 94 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 GPSM3Q9Y4H4 160 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 ATG2BQ96BY7 2078 aa11.62□□□□□ -0.55
TDP1-212ENST00000555565 PCNX2A6NKB5 2137 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 CUTAO60888 179 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 YEATS4O95619 227 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 FGF19O95750 216 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 HAPLN1P10915 354 aaPredicted RBP11.61□□□□□ -0.55
TDP1-212ENST00000555565 HOXD13P35453 343 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 CYP4F8P98187 520 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 VEPH1Q14D04 833 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 TMEM150AQ86TG1 271 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 PROSER1Q86XN7 944 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 GPD1LQ8N335 351 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 PDCL2Q8N4E4 241 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 LRRC52Q8N7C0 313 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 GIPC2Q8TF65 315 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 NOC3LQ8WTT2 800 aaKnown RBP11.61□□□□□ -0.55
TDP1-212ENST00000555565 C2orf15Q8WU43 125 aaKnown RBP11.61□□□□□ -0.55
TDP1-212ENST00000555565 DHX58Q96C10 678 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 MTMR12Q9C0I1 747 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 LRRC27Q9C0I9 530 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 CUEDC2Q9H467 287 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 EBF3Q9H4W6 596 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 SIX4Q9UIU6 781 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 ITGA11Q9UKX5 1188 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 INVSQ9Y283 1065 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 ASCC3Q8N3C0 2202 aaKnown RBP11.61□□□□□ -0.55
TDP1-212ENST00000555565 IGSF10Q6WRI0 2623 aa11.61□□□□□ -0.55
TDP1-212ENST00000555565 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
TDP1-212ENST00000555565 PTPRJQ12913 1337 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 CACNA1EQ15878 2313 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 ANTXRLA6NF34 631 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 HUS1O60921 280 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 APBB3O95704 486 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 ARSAP15289 507 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 HMGA1P17096 107 aaKnown RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 DRD1P21728 446 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 BCKDHBP21953 392 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 BFSP1Q12934 665 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 DMC1Q14565 340 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 FOXD4L6Q3SYB3 417 aaPredicted RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 ARHGAP15Q53QZ3 475 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 LMBRD2Q68DH5 695 aaPredicted RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 CNNM4Q6P4Q7 775 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 FOXD4L3Q6VB84 417 aaPredicted RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 STXBP4Q6ZWJ1 553 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 EPM2AIP1Q7L775 607 aaPredicted RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 PIP4P1Q86T03 277 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 CBWD2Q8IUF1 395 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 DCP1BQ8IZD4 617 aaKnown RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 IQUBQ8NA54 791 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 OR5B17Q8NGF7 314 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 RPLP0P6Q8NHW5 317 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 USP13Q92995 863 aaPredicted RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 PI4K2AQ9BTU6 479 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 THG1LQ9NWX6 298 aaKnown RBP11.6□□□□□ -0.55
TDP1-212ENST00000555565 GDAP2Q9NXN4 497 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 PCDHB5Q9Y5E4 795 aa11.6□□□□□ -0.55
TDP1-212ENST00000555565 NUP205Q92621 2012 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms