RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ATP5F1P24539 256 aaPredicted RBP4.68□□□□□ -1.66
SNX6-204ENST00000555541 POLGP54098 1239 aaPredicted RBP4.68□□□□□ -1.66
SNX6-204ENST00000555541 LILRA4P59901 499 aa4.68□□□□□ -1.66
SNX6-204ENST00000555541 NKX6-1P78426 367 aaPredicted RBP4.68□□□□□ -1.66
SNX6-204ENST00000555541 EXOSC9Q06265 439 aaKnown RBP4.68□□□□□ -1.66
SNX6-204ENST00000555541 LONRF3Q496Y0 759 aa4.68□□□□□ -1.66
SNX6-204ENST00000555541 MEPCEQ7L2J0 689 aaKnown RBP4.68□□□□□ -1.66
SNX6-204ENST00000555541 NRACQ8N912 160 aa4.68□□□□□ -1.66
SNX6-204ENST00000555541 PRPF38AQ8NAV1 312 aaKnown RBP4.68□□□□□ -1.66
SNX6-204ENST00000555541 NDRG4Q9ULP0 352 aaKnown RBP4.68□□□□□ -1.66
SNX6-204ENST00000555541 PCDHA1Q9Y5I3 950 aa4.68□□□□□ -1.66
SNX6-204ENST00000555541 FER1L4A9Z1Z3 1794 aa4.68□□□□□ -1.66
SNX6-204ENST00000555541 PDE8BO95263 885 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 GNAI2P04899 355 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 CSF1RP07333 972 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 ATXN1LP0C7T5 689 aaKnown RBP4.67□□□□□ -1.66
SNX6-204ENST00000555541 SNHG28P0DPA3 235 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 LOXL3P58215 753 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 ARHGAP40Q5TG30 622 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 MEX3CQ5U5Q3 659 aaKnown RBP4.67□□□□□ -1.66
SNX6-204ENST00000555541 KIRREL2Q6UWL6 708 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 LRRC71Q8N4P6 559 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 CPA6Q8N4T0 437 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 VCPIP1Q96JH7 1222 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 EBF3Q9H4W6 596 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 PNPOQ9NVS9 261 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 KLHL13Q9P2N7 655 aa4.67□□□□□ -1.66
SNX6-204ENST00000555541 SCAF8Q9UPN6 1271 aaKnown RBP4.67□□□□□ -1.66
SNX6-204ENST00000555541 ALG1L2C9J202 215 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 POC1B-GALNT4F8VUJ3 575 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 POU2F2P09086 479 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 NPSP0C0P6 89 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 PXNP49023 591 aaPredicted RBP4.66□□□□□ -1.66
SNX6-204ENST00000555541 PDE1AP54750 535 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 HTRA4P83105 476 aaPredicted RBP4.66□□□□□ -1.66
SNX6-204ENST00000555541 FAM50AQ14320 339 aaKnown RBP4.66□□□□□ -1.66
SNX6-204ENST00000555541 IQCB1Q15051 598 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 PTPN21Q16825 1174 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 RNASE12Q5GAN4 147 aaKnown RBP4.66□□□□□ -1.66
SNX6-204ENST00000555541 USP45Q70EL2 814 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 PNMA8AQ86V59 439 aaPredicted RBP4.66□□□□□ -1.66
SNX6-204ENST00000555541 GALNT4Q8N4A0 578 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 TERB1Q8NA31 727 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 SMRP1Q8NCR6 262 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 C16orf52Q8NHV5 167 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 ZNF398Q8TD17 642 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 SOCS4Q8WXH5 440 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 R3HDM4Q96D70 268 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 SNX18Q96RF0 628 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 GLOD4Q9HC38 313 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 LMBRD1Q9NUN5 540 aa4.66□□□□□ -1.66
SNX6-204ENST00000555541 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 hCG_1984214I3L0E3 225 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 PLS1Q14651 629 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 CYP1B1Q16678 543 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 THEMIS2Q5TEJ8 643 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 PXDC1Q5TGL8 231 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 RGS7BPQ6MZT1 257 aaPredicted RBP4.65□□□□□ -1.67
SNX6-204ENST00000555541 CNGA4Q8IV77 575 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 PIGOQ8TEQ8 1089 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 DAZAP1Q96EP5 407 aaKnown RBP4.65□□□□□ -1.67
SNX6-204ENST00000555541 ASIC5Q9NY37 505 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 FEZ2Q9UHY8 353 aaPredicted RBP4.65□□□□□ -1.67
SNX6-204ENST00000555541 MRPS17Q9Y2R5 130 aaKnown RBP4.65□□□□□ -1.67
SNX6-204ENST00000555541 WASHC2CQ9Y4E1 1318 aa4.65□□□□□ -1.67
SNX6-204ENST00000555541 SOCS2O14508 198 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 UNC5CO95185 931 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 FTLP02792 175 aaPredicted RBP4.64□□□□□ -1.67
SNX6-204ENST00000555541 IL1R2P27930 398 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 HOXD9P28356 352 aaPredicted RBP4.64□□□□□ -1.67
SNX6-204ENST00000555541 EVA1CP58658 441 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 LRRC41Q15345 812 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 TWIST1Q15672 202 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 TBC1D25Q3MII6 688 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 ZIK1Q3SY52 487 aaPredicted RBP4.64□□□□□ -1.67
SNX6-204ENST00000555541 MIS18BP1Q6P0N0 1132 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 PIP4P1Q86T03 277 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 MIER2Q8N344 545 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 CELF5Q8N6W0 485 aaKnown RBP4.64□□□□□ -1.67
SNX6-204ENST00000555541 NANOGP1Q8N7R0 232 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.64□□□□□ -1.67
SNX6-204ENST00000555541 FAM167AQ96KS9 214 aa4.64□□□□□ -1.67
SNX6-204ENST00000555541 TRNAU1APQ9NX07 287 aaKnown RBP4.64□□□□□ -1.67
SNX6-204ENST00000555541 TTC3P53804 2025 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 IGKV2D-30A0A075B6S6 120 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 FGBP02675 491 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 CHRM5P08912 532 aaPredicted RBP4.63□□□□□ -1.67
SNX6-204ENST00000555541 KRT10P13645 584 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 FPR3P25089 353 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 VIPR2P41587 438 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 RENBPP51606 427 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 SOX8P57073 446 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 E2F2Q14209 437 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 LY6KQ17RY6 165 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 TRIM71Q2Q1W2 868 aaKnown RBP4.63□□□□□ -1.67
SNX6-204ENST00000555541 LEXMQ3ZCV2 418 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 MTHFD1LQ6UB35 978 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 ZNF813Q6ZN06 617 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 ZNF280BQ86YH2 543 aa4.63□□□□□ -1.67
SNX6-204ENST00000555541 ABHD11Q8NFV4 315 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms