RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KRT7P08729 469 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 ZNF865P0CJ78 1059 aaPredicted RBP25.53■■□□□ 1.68
TMEM260-207ENST00000555497 MIPP30301 263 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 MMP13P45452 471 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 MAP2K5Q13163 448 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 CCL14Q16627 93 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 CHADLQ6NUI6 762 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 BBOF1Q8ND07 529 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 TMEM40Q8WWA1 233 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 NKD2Q969F2 451 aaPredicted RBP25.53■■□□□ 1.68
TMEM260-207ENST00000555497 TMEM121Q9BTD3 319 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 NXF3Q9H4D5 531 aaKnown RBP25.53■■□□□ 1.68
TMEM260-207ENST00000555497 C10orf88Q9H8K7 445 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 SNX9Q9Y5X1 595 aa25.53■■□□□ 1.68
TMEM260-207ENST00000555497 SRRM3A6NNA2 597 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 IGF2BP3O00425 579 aaKnown RBP eCLIP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 DARSP14868 501 aaKnown RBP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 ARSEP51690 589 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 ZNF200P98182 395 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 TAZQ16635 292 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 HADHQ16836 314 aaKnown RBP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 TLK2Q86UE8 772 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 SLC35B2Q8TB61 432 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 DNAJB3Q8WWF6 145 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 ROPN1BQ9BZX4 212 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 ROPN1Q9HAT0 212 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 SMIM35A0A1B0GVV1 85 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 E5RJQ4 531 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 ADAM17P78536 824 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 MYO1EQ12965 1108 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 MFSD10Q14728 455 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 GOLGA7BQ2TAP0 167 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 CCDC38Q502W7 563 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 PPP1R26Q5T8A7 1209 aaPredicted RBP25.52■■□□□ 1.68
TMEM260-207ENST00000555497 MFSD5Q6N075 450 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 ALKAL1Q6UXT8 129 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 FAM183BPQ6ZVS7 135 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 ACOT1Q86TX2 421 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 PEBP4Q96S96 227 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 FAM107BQ9H098 131 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 SLC5A4Q9NY91 659 aa25.52■■□□□ 1.68
TMEM260-207ENST00000555497 DNALI1O14645 258 aaPredicted RBP25.51■■□□□ 1.67
TMEM260-207ENST00000555497 FAM107AO95990 144 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 CROCCP2Q86T23 111 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 LPIN3Q9BQK8 851 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 CNOT10Q9H9A5 744 aaKnown RBP25.51■■□□□ 1.67
TMEM260-207ENST00000555497 DERAQ9Y315 318 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 GMNCA6NCL1 334 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 CST8O60676 142 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 TRUB2O95900 331 aaKnown RBP25.51■■□□□ 1.67
TMEM260-207ENST00000555497 ITGAVP06756 1048 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 AKAP5P24588 427 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 RGS7P49802 495 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 GPS1Q13098 491 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 NOTUMQ6P988 496 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 ACTL9Q8TC94 416 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 C9orf72Q96LT7 481 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 APOL6Q9BWW8 343 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 KIAA1257Q9ULG3 409 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 EFR3BQ9Y2G0 817 aa25.51■■□□□ 1.67
TMEM260-207ENST00000555497 CHN1P15882 459 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 OTUD4Q01804 1114 aaKnown RBP25.5■■□□□ 1.67
TMEM260-207ENST00000555497 PLCB3Q01970 1234 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 OR6B2Q6IFH4 312 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 BBS12Q6ZW61 710 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 CYP4V2Q6ZWL3 525 aaPredicted RBP25.5■■□□□ 1.67
TMEM260-207ENST00000555497 TTC30AQ86WT1 665 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 ZCCHC9Q8N567 271 aaKnown RBP25.5■■□□□ 1.67
TMEM260-207ENST00000555497 CMASQ8NFW8 434 aaPredicted RBP25.5■■□□□ 1.67
TMEM260-207ENST00000555497 IPO4Q8TEX9 1081 aaKnown RBP25.5■■□□□ 1.67
TMEM260-207ENST00000555497 SELENOSQ9BQE4 189 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 CTNNAL1Q9UBT7 734 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 USP18Q9UMW8 372 aa25.5■■□□□ 1.67
TMEM260-207ENST00000555497 MYO1CO00159 1063 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 TREHO43280 583 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 HCRTO43612 131 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 GRAP2O75791 330 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 RECQL4O94761 1208 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 ZNF143P52747 638 aaPredicted RBP25.49■■□□□ 1.67
TMEM260-207ENST00000555497 PKDCCQ504Y2 493 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 PMF1Q6P1K2 205 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 RXFP2Q8WXD0 754 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 HSPH1Q92598 858 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 FAM49BQ9NUQ9 324 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 C2CD4BA6NLJ0 364 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 FOXO6A8MYZ6 492 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 GABBR2O75899 941 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 BEX3Q00994 111 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 C15orf59Q2T9L4 293 aaPredicted RBP25.49■■□□□ 1.67
TMEM260-207ENST00000555497 EXOC3L1Q86VI1 746 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 RELL1Q8IUW5 271 aa25.49■■□□□ 1.67
TMEM260-207ENST00000555497 RBM15Q96T37 977 aaKnown RBP eCLIP25.49■■□□□ 1.67
TMEM260-207ENST00000555497 FAM124BQ9H5Z6 455 aaPredicted RBP25.49■■□□□ 1.67
TMEM260-207ENST00000555497 SGK1O00141 431 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 HAS3O00219 553 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 TRIM66O15016 1216 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 PSEN2P49810 448 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 GDF10P55107 478 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 QPCTQ16769 361 aa25.48■■□□□ 1.67
TMEM260-207ENST00000555497 ERMARDQ5T6L9 678 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms