RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 UBR7Q8N806 425 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 GIPC2Q8TF65 315 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 TTPALQ9BTX7 342 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 UBE2OQ9C0C9 1292 aaKnown RBP10.77□□□□□ -0.69
NEK9-205ENST00000555405 MTIF3Q9H2K0 278 aaKnown RBP10.77□□□□□ -0.69
NEK9-205ENST00000555405 KLHL11Q9NVR0 708 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 MARCH5Q9NX47 278 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 PCSK1NQ9UHG2 260 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 COG5Q9UP83 839 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 DAAM1Q9Y4D1 1078 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 PCDHB12Q9Y5F1 795 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 SIP14410 1827 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 GJB5O95377 273 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 ERBB2P04626 1255 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 GZMAP12544 262 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 UNGP13051 313 aaPredicted RBP10.76□□□□□ -0.69
NEK9-205ENST00000555405 WARSP23381 471 aaKnown RBP10.76□□□□□ -0.69
NEK9-205ENST00000555405 GPR15P49685 360 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 CACNA2D1P54289 1103 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 PDCLQ13371 301 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 TMEM86AQ8N2M4 240 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 MSANTD4Q8NCY6 345 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 RFFLQ8WZ73 363 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 PIWIL1Q96J94 861 aaKnown RBP10.76□□□□□ -0.69
NEK9-205ENST00000555405 NAPGQ99747 312 aaPredicted RBP10.76□□□□□ -0.69
NEK9-205ENST00000555405 ZNF185O15231 689 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 ADAM12O43184 909 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 TMEM253P0C7T8 217 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 KRT3P12035 628 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 GPD2P43304 727 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 ADIGQ0VDE8 80 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 DUSP4Q13115 394 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 ZNF211Q13398 564 aaPredicted RBP10.76□□□□□ -0.69
NEK9-205ENST00000555405 PSRC1Q6PGN9 363 aaPredicted RBP10.76□□□□□ -0.69
NEK9-205ENST00000555405 TRIM72Q6ZMU5 477 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 EP400NLQ6ZTU2 488 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 UBE2Q1Q7Z7E8 422 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 FAM35AQ86V20 835 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 TTC39CQ8N584 583 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 IGSF21Q96ID5 467 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 SYT11Q9BT88 431 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 ISCUQ9H1K1 167 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 NGRNQ9NPE2 291 aaKnown RBP10.76□□□□□ -0.69
NEK9-205ENST00000555405 SPG21Q9NZD8 308 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 EHD2Q9NZN4 543 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 ANK1P16157 1881 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 KCNK3O14649 394 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 CAPN9O14815 690 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 KRT17Q04695 432 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 C10orf76Q5T2E6 689 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 ZNF280DQ6N043 979 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 LCLAT1Q6UWP7 414 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 HERC6Q8IVU3 1022 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 JOSD2Q8TAC2 188 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 TSPAN18Q96SJ8 248 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 CDH9Q9ULB4 789 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 PCDHB8Q9UN66 801 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 CNTN6Q9UQ52 1028 aa10.76□□□□□ -0.69
NEK9-205ENST00000555405 STAU1O95793 577 aaKnown RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 CYP1A1P04798 512 aaPredicted RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 USP17L7P0C7H9 530 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 MRPS25P82663 173 aaKnown RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 IFI16Q16666 785 aaKnown RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 USP41Q3LFD5 358 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 RBM23Q86U06 439 aaKnown RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 CRYBG2Q8N1P7 616 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 ANKRD52Q8NB46 1076 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 KLHL23Q8NBE8 558 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 TRIM58Q8NG06 486 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 SCAMP5Q8TAC9 235 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 ADAM32Q8TC27 787 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 EDEM1Q92611 657 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 RTP3Q9BQQ7 232 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 CWH43Q9H720 699 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 DSEQ9UL01 958 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 INSL6Q9Y581 213 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 ARHGEF37A1IGU5 675 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 GRID2IPA4D2P6 1211 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 RFC1P35251 1148 aaPredicted RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 TKTL1P51854 596 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 BCAT1P54687 386 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 MCCD1P59942 119 aaPredicted RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 BST2Q10589 180 aaKnown RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 PSMD5Q16401 504 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 INTS6LQ5JSJ4 861 aaKnown RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 PLPP4Q5VZY2 271 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 RSPO2Q6UXX9 243 aaPredicted RBP10.75□□□□□ -0.69
NEK9-205ENST00000555405 TPCN2Q8NHX9 752 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 OLIG1Q8TAK6 271 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 C17orf80Q9BSJ5 609 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 ZWILCHQ9H900 591 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 KIAA1257Q9ULG3 409 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 ALG6Q9Y672 507 aa10.75□□□□□ -0.69
NEK9-205ENST00000555405 CEP104O60308 925 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 EFCAB14O75071 495 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CALB1P05937 261 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 URODP06132 367 aa10.74□□□□□ -0.69
NEK9-205ENST00000555405 CA3P07451 260 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms