RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF768Q9H5H4 540 aaKnown RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 AGO4Q9HCK5 861 aaKnown RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 RGL1Q9NZL6 768 aa6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 DNMT3BQ9UBC3 853 aaKnown RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 MORC2Q9Y6X9 1032 aaPredicted RBP6.42□□□□□ -1.38
CKS1BP1-201ENST00000555221 RGS10O43665 173 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 NDUFA10O95299 355 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 LAG3P18627 525 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 RAB30Q15771 203 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZIK1Q3SY52 487 aaPredicted RBP6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 TUBB8Q3ZCM7 444 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 RBM20Q5T481 1227 aaKnown RBP6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 ARHGAP40Q5TG30 622 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 ICE2Q659A1 982 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 GGT6Q6P531 493 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 TLDC1Q6P9B6 456 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 C1orf210Q8IVY1 113 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 SLC15A3Q8IY34 581 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 GLIS1Q8NBF1 620 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 CPEB3Q8NE35 698 aaKnown RBP6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 SLC25A43Q8WUT9 341 aaPredicted RBP6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 PPM1EQ8WY54 764 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 PPP2R3CQ969Q6 453 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 NACC2Q96BF6 587 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZNF668Q96K58 619 aaPredicted RBP6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZCWPW1Q9H0M4 648 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 CXorf36Q9H7Y0 433 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZBTB26Q9HCK0 441 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 INTS13Q9NVM9 706 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 NDRG4Q9ULP0 352 aaKnown RBP6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 MAP3K2Q9Y2U5 619 aa6.41□□□□□ -1.38
CKS1BP1-201ENST00000555221 TRGV11A0A075B6L2 103 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 A0A087WZ62 844 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 hCG_1984214I3L0E3 225 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 ZFPL1O95159 310 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 PDIA3P30101 505 aaKnown RBP6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 MAPKAPK3Q16644 382 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 PFKFB4Q16877 469 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 USP39Q53GS9 565 aaKnown RBP6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 HSP90AB4PQ58FF6 505 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 FAXCQ5TGI0 409 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 RGS7BPQ6MZT1 257 aaPredicted RBP6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 MRNIPQ6NTE8 343 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 CRTC1Q6UUV9 634 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 PALM2Q8IXS6 379 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 MYRIPQ8NFW9 859 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 IL17DQ8TAD2 202 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 C18orf8Q96DM3 657 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 MYEOVQ96EZ4 313 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 SCLT1Q96NL6 688 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 RMDN3Q96TC7 470 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 MYLK2Q9H1R3 596 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 TMEM8AQ9HCN3 771 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 CEP72Q9P209 647 aa6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 MRPS17Q9Y2R5 130 aaKnown RBP6.4□□□□□ -1.38
CKS1BP1-201ENST00000555221 PIP5K1CO60331 668 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 SRGAP2O75044 1071 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 COQ9O75208 318 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 PEX11BO96011 259 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 EGR1P18146 543 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 PRKAR1BP31321 381 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 MAGEA10P43363 369 aaPredicted RBP6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 PDE6CP51160 858 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 ITGA8P53708 1063 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 SPARCL1Q14515 664 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 TMEM95Q3KNT9 176 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 CERCAMQ5T4B2 595 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 KIAA0408Q6ZU52 694 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 KCTD20Q7Z5Y7 419 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 FAM109AQ8N4B1 249 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 MYCT1Q8N699 235 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 EXTL1Q92935 676 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 TRIM63Q969Q1 353 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 FUBP1Q96AE4 644 aaKnown RBP6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 FAM136AQ96C01 138 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 TRIM5Q9C035 493 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 PCDHAC1Q9H158 963 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 UNKLQ9H9P5 680 aaKnown RBP6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 OBP2BQ9NPH6 170 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 HPSEQ9Y251 543 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 TSC22D4Q9Y3Q8 395 aa6.39□□□□□ -1.39
CKS1BP1-201ENST00000555221 TMEM200CA6NKL6 621 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 SYT5O00445 386 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 NPC1O15118 1278 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 CD3EAPO15446 510 aaKnown RBP6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 ATICP31939 592 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 PPM1FP49593 454 aaPredicted RBP6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 CCNIQ14094 377 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 PTK2BQ14289 1009 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 SLC5A9Q2M3M2 681 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 CCDC28AQ8IWP9 274 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 CACNA2D3Q8IZS8 1091 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 CPXCR1Q8N123 301 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 SYNE4Q8N205 404 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 DNAJB14Q8TBM8 379 aa6.38□□□□□ -1.39
CKS1BP1-201ENST00000555221 FAM71BQ8TC56 605 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms