RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 KCNJ12Q14500 433 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 MIIPQ5JXC2 388 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 CDKAL1Q5VV42 579 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 GAREM2Q75VX8 874 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 FAM35AQ86V20 835 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 TTC39CQ8N584 583 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 C12orf29Q8N999 325 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 SPATA17Q96L03 361 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 INTS2Q9H0H0 1204 aaKnown RBP15.11■□□□□ 0.01
SHMT2-217ENST00000555116 MUTYHQ9UIF7 546 aa15.11■□□□□ 0.01
SHMT2-217ENST00000555116 SLC38A8A6NNN8 435 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 ASGR2P07307 311 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 CCDC130P13994 396 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 GJA1P17302 382 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 TBXAS1P24557 533 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-217ENST00000555116 RAD23BP54727 409 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 ARHGEF19Q8IW93 802 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 C8orf48Q96LL4 319 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 TUBGCP2Q9BSJ2 902 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 GTPBP10A4D1E9 387 aaKnown RBP15.1■□□□□ 0.01
SHMT2-217ENST00000555116 ANHXE9PGG2 379 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 F8VP50 259 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 TRIM66O15016 1216 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 CSH1P0DML2 217 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 CSH2P0DML3 217 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 EEF1GP26641 437 aaKnown RBP15.1■□□□□ 0.01
SHMT2-217ENST00000555116 GABRR2P28476 465 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 GRIK1P39086 918 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 NCAPHQ15003 741 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 ZNF394Q53GI3 561 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 TCP11X2Q5H9J9 407 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 SLC4A11Q8NBS3 891 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 SLC2A14Q8TDB8 520 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 KAT5Q92993 513 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 MCRS1Q96EZ8 462 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 CEP295NLQ96MC4 621 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 CRACR2AQ9BSW2 395 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 MED10Q9BTT4 135 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 FAM49BQ9NUQ9 324 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 FANCLQ9NW38 375 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 GDE1Q9NZC3 331 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 GCNT4Q9P109 453 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 TECTAO75443 2155 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 ATP8B3O60423 1300 aa15.1■□□□□ 0.01
SHMT2-217ENST00000555116 A0A1W2PRU2 124 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 PI4K2BG5E9Z4 385 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 ACO1P21399 889 aaKnown RBP15.09■□□□□ 0.01
SHMT2-217ENST00000555116 MYL5Q02045 173 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 HTR4Q13639 388 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 TEAD2Q15562 447 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 TAF12Q16514 161 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 PTPN21Q16825 1174 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 ANO6Q4KMQ2 910 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 VWA3BQ502W6 1294 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 PHLDB3Q6NSJ2 640 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 TMEM150AQ86TG1 271 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 TRMT2BQ96GJ1 504 aaKnown RBP15.09■□□□□ 0.01
SHMT2-217ENST00000555116 SMARCD1Q96GM5 515 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 MYRFLQ96LU7 910 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 HNRNPABQ99729 332 aaKnown RBP15.09■□□□□ 0.01
SHMT2-217ENST00000555116 NDST4Q9H3R1 872 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 KCNK12Q9HB15 430 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 IGSF9Q9P2J2 1179 aa15.09■□□□□ 0.01
SHMT2-217ENST00000555116 DCXO43602 365 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 FGF19O95750 216 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 F11P03951 625 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 PRKCSHP14314 528 aaPredicted RBP15.08■□□□□ 0.01
SHMT2-217ENST00000555116 SLC9A1P19634 815 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 ANXA13P27216 316 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 YWHAEP62258 255 aaKnown RBP15.08■□□□□ 0.01
SHMT2-217ENST00000555116 GCNT1Q02742 428 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 GBP6Q6ZN66 633 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 RRAGAQ7L523 313 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 ST13P5Q8NFI4 369 aaPredicted RBP15.08■□□□□ 0.01
SHMT2-217ENST00000555116 RSAD2Q8WXG1 361 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 CYFIP2Q96F07 1278 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 TMEM176AQ96HP8 235 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 ZSWIM3Q96MP5 696 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 KREMEN1Q96MU8 473 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 HSD3B7Q9H2F3 369 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 RRAGDQ9NQL2 400 aaPredicted RBP15.08■□□□□ 0.01
SHMT2-217ENST00000555116 KRT82Q9NSB4 513 aa15.08■□□□□ 0.01
SHMT2-217ENST00000555116 MAGED2Q9UNF1 606 aaPredicted RBP15.08■□□□□ 0.01
SHMT2-217ENST00000555116 MUC3AQ02505 3323 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 AP1G2O75843 785 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 TRIM21P19474 475 aaKnown RBP15.08■□□□□ 0
SHMT2-217ENST00000555116 PON1P27169 355 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 CDC25CP30307 473 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 EXOC3L4Q17RC7 722 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 TRIM65Q6PJ69 517 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 PARM1Q6UWI2 310 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 ZMIZ2Q8NF64 920 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 FGF14Q92915 247 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 NXPE3Q969Y0 559 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 HEXIM2Q96MH2 286 aaKnown RBP15.08■□□□□ 0
SHMT2-217ENST00000555116 KCNK16Q96T55 309 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 SMOQ99835 787 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 BPIFA3Q9BQP9 254 aa15.08■□□□□ 0
SHMT2-217ENST00000555116 TTLL2Q9BWV7 592 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms