RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 PKMYT1Q99640 499 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 FBRSL1Q9HCM7 1045 aaKnown RBP16.59■□□□□ 0.25
NEDD1-207ENST00000555114 MAGEC2Q9UBF1 373 aaPredicted RBP16.59■□□□□ 0.25
NEDD1-207ENST00000555114 SRPRBQ9Y5M8 271 aaKnown RBP16.59■□□□□ 0.25
NEDD1-207ENST00000555114 WNT6Q9Y6F9 365 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 SPAG17Q6Q759 2223 aa16.59■□□□□ 0.25
NEDD1-207ENST00000555114 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 GOLGA8JA6NMD2 632 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 GABRDO14764 452 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
NEDD1-207ENST00000555114 TNNC2P02585 160 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 HDCP19113 662 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 PMLP29590 882 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 GBP1P32455 592 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 STAT6P42226 847 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 DGKEP52429 567 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 CREB5Q02930 508 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 EML3Q32P44 896 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 USP39Q53GS9 565 aaKnown RBP16.58■□□□□ 0.24
NEDD1-207ENST00000555114 ARL14EPQ8N8R7 260 aaPredicted RBP16.58■□□□□ 0.24
NEDD1-207ENST00000555114 SH3RF2Q8TEC5 729 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 DNAJC19Q96DA6 116 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 SPATA17Q96L03 361 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 CYP2S1Q96SQ9 504 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 LSM14BQ9BX40 385 aaKnown RBP16.58■□□□□ 0.24
NEDD1-207ENST00000555114 DUSP15Q9H1R2 295 aaPredicted RBP16.58■□□□□ 0.24
NEDD1-207ENST00000555114 CDH9Q9ULB4 789 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 ARHGAP26Q9UNA1 814 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 CLIC4Q9Y696 253 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 DENND4CQ5VZ89 1909 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 SDK1Q7Z5N4 2213 aa16.58■□□□□ 0.24
NEDD1-207ENST00000555114 TM4SF5O14894 197 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 CAVIN2O95810 425 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 GRIK1P39086 918 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 PPP3CCP48454 512 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 WNT7BP56706 349 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 SHC2P98077 582 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 SOWAHAQ2M3V2 549 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 DAB2IPQ5VWQ8 1189 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 FAM171BQ6P995 826 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 USP49Q70CQ1 688 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 OSTM1Q86WC4 334 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 CCDC65Q8IXS2 484 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 HPDLQ96IR7 371 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 SLC22A12Q96S37 553 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 SYT15Q9BQS2 421 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 CBWD1Q9BRT8 395 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 EDEM2Q9BV94 578 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 PCIF1Q9H4Z3 704 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 PDE11AQ9HCR9 933 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 RXFP3Q9NSD7 469 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 PANK4Q9NVE7 773 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 TRPM5Q9NZQ8 1165 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 GCNT4Q9P109 453 aa16.57■□□□□ 0.24
NEDD1-207ENST00000555114 FBXO2Q9UK22 296 aaPredicted RBP16.57■□□□□ 0.24
NEDD1-207ENST00000555114 C2orf78A6NCI8 922 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 ZNF233A6NK53 670 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 TRIM66O15016 1216 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 KCNK5O95279 499 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 CASP5P51878 434 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 CYP27A1Q02318 531 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 DUOXA2Q1HG44 320 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 DENND5BQ6ZUT9 1274 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 KIAA1958Q8N8K9 716 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 CXorf38Q8TB03 319 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 MYLPFQ96A32 169 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 SMOC1Q9H4F8 434 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 KIAA1586Q9HCI6 787 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 INTS13Q9NVM9 706 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 POLR3BQ9NW08 1133 aaPredicted RBP16.56■□□□□ 0.24
NEDD1-207ENST00000555114 SIX4Q9UIU6 781 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 OBSL1O75147 1896 aa16.56■□□□□ 0.24
NEDD1-207ENST00000555114 CNOT1A5YKK6 2376 aaKnown RBP16.56■□□□□ 0.24
NEDD1-207ENST00000555114 FRMD3A2A2Y4 597 aa16.55■□□□□ 0.24
NEDD1-207ENST00000555114 BCLAF3A2AJT9 711 aaKnown RBP16.55■□□□□ 0.24
NEDD1-207ENST00000555114 SLC9A3R1O14745 358 aaPredicted RBP16.55■□□□□ 0.24
NEDD1-207ENST00000555114 ALDH1A2O94788 518 aa16.55■□□□□ 0.24
NEDD1-207ENST00000555114 PSMC1P62191 440 aaKnown RBP16.55■□□□□ 0.24
NEDD1-207ENST00000555114 NAIF1Q69YI7 327 aaPredicted RBP16.55■□□□□ 0.24
NEDD1-207ENST00000555114 CLIC6Q96NY7 704 aa16.55■□□□□ 0.24
NEDD1-207ENST00000555114 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
NEDD1-207ENST00000555114 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
NEDD1-207ENST00000555114 ATG2BQ96BY7 2078 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 KHNYNO15037 678 aaKnown RBP16.54■□□□□ 0.24
NEDD1-207ENST00000555114 DCLK1O15075 740 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 PRPF6O94906 941 aaKnown RBP16.54■□□□□ 0.24
NEDD1-207ENST00000555114 WARSP23381 471 aaKnown RBP16.54■□□□□ 0.24
NEDD1-207ENST00000555114 BDNFP23560 247 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 LMBRD2Q68DH5 695 aaPredicted RBP16.54■□□□□ 0.24
NEDD1-207ENST00000555114 TCEAL6Q6IPX3 200 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 PSAPL1Q6NUJ1 521 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 WDR49Q8IV35 697 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 USP33Q8TEY7 942 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 TCEAL3Q969E4 200 aa16.54■□□□□ 0.24
NEDD1-207ENST00000555114 CNOT6LQ96LI5 555 aaKnown RBP16.54■□□□□ 0.24
NEDD1-207ENST00000555114 SNX25Q9H3E2 840 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms