RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 GRIK1P39086 918 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 RAD23BP54727 409 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 TYRO3Q06418 890 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 CUL2Q13617 745 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
SYNE2-214ENST00000554928 WDR44Q5JSH3 913 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 FAM78AQ5JUQ0 283 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 MIIPQ5JXC2 388 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 CYP4A22Q5TCH4 519 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 TANGO2Q6ICL3 276 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 GJB7Q6PEY0 223 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 SASS6Q6UVJ0 657 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 C4orf50Q6ZRC1 276 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 RRAGAQ7L523 313 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 UNC93AQ86WB7 457 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 EHBP1Q8NDI1 1231 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 SMOQ99835 787 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 KXD1Q9BQD3 176 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 MED10Q9BTT4 135 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 DACH1Q9UI36 760 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
SYNE2-214ENST00000554928 NFE2L3Q9Y4A8 694 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 ASB3Q9Y575 518 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 TRIOO75962 3097 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 RNF225M0QZC1 329 aaPredicted RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 FGFR1OPO95684 399 aaKnown RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 F11P03951 625 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 SLC9A1P19634 815 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 ACO1P21399 889 aaKnown RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 VIPR2P41587 438 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 MTIF2P46199 727 aaKnown RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 RPL10AP62906 217 aaKnown RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 ZXDAP98168 799 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 VEPH1Q14D04 833 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 NCAPHQ15003 741 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 MAPRE1Q15691 268 aaKnown RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 STX1AQ16623 288 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 IER5LQ5T953 404 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 PHLDB3Q6NSJ2 640 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 VSTM1Q6UX27 236 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 ITIH5Q86UX2 942 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 SLC44A3Q8N4M1 653 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 ENOX1Q8TC92 643 aaKnown RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 TNIP3Q96KP6 325 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 FUCA2Q9BTY2 467 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 NT5C1AQ9BXI3 368 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 SMG9Q9H0W8 520 aaKnown RBP13.13□□□□□ -0.31
SYNE2-214ENST00000554928 HSD3B7Q9H2F3 369 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 ATXN3LQ9H3M9 355 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 KRT82Q9NSB4 513 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 ANO10Q9NW15 660 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 TAB2Q9NYJ8 693 aa13.13□□□□□ -0.31
SYNE2-214ENST00000554928 PTPRDP23468 1912 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 KCNJ18B7U540 433 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 ZNF197O14709 1029 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 P4HA2O15460 535 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 AP1G2O75843 785 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 KCNJ12Q14500 433 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 KLHL40Q2TBA0 621 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 GPR158Q5T848 1215 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 PPP1R26Q5T8A7 1209 aaPredicted RBP13.12□□□□□ -0.31
SYNE2-214ENST00000554928 CDKAL1Q5VV42 579 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 DPY19L2P1Q6NXN4 242 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 GPRIN1Q7Z2K8 1008 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 PPM1KQ8N3J5 372 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
SYNE2-214ENST00000554928 CYFIP2Q96F07 1278 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 C8orf48Q96LL4 319 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 ASB16Q96NS5 453 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 NT5C1BQ96P26 610 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 LRRC3BQ96PB8 259 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 SLC46A2Q9BY10 475 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 SIX2Q9NPC8 291 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 FANCLQ9NW38 375 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 GCNT4Q9P109 453 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 SORCS3Q9UPU3 1222 aa13.12□□□□□ -0.31
SYNE2-214ENST00000554928 HHLA1C9JL84 531 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 TNFRSF10BO14763 440 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 MICAL2O94851 1124 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 PRAMEF12O95522 483 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 PDGFBP01127 241 aaPredicted RBP13.11□□□□□ -0.31
SYNE2-214ENST00000554928 CSH1P0DML2 217 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 CSH2P0DML3 217 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 PGFP49763 221 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 MAP3K7CLP57077 242 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 IFRD2Q12894 506 aaPredicted RBP13.11□□□□□ -0.31
SYNE2-214ENST00000554928 TDGQ13569 410 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 TAF12Q16514 161 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 MAN2A1Q16706 1144 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 ANO6Q4KMQ2 910 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 VWA3BQ502W6 1294 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 TCP11X2Q5H9J9 407 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 CT47A1Q5JQC4 288 aaPredicted RBP13.11□□□□□ -0.31
SYNE2-214ENST00000554928 TXNDC8Q6A555 127 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 CLEC20AQ6ZU45 233 aa13.11□□□□□ -0.31
SYNE2-214ENST00000554928 LEMD2Q8NC56 503 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms