RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 UQCRHLA0A096LP55 91 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 A0A1W2PRU2 124 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 PI15O43692 258 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 UQCRHP07919 91 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 PCSK1P29120 753 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 LHX1P48742 406 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 TCF15Q12870 199 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 PSMD6Q15008 389 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 TEAD2Q15562 447 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 ZCWPW2Q504Y3 356 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 TRAPPC11Q7Z392 1133 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 C12orf56Q8IXR9 622 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 ADGRF2Q8IZF7 708 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 TOP6BLQ8N6T0 577 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 CXorf38Q8TB03 319 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 SHKBP1Q8TBC3 707 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-214ENST00000554604 SPATA18Q8TC71 538 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 SMARCD2Q92925 531 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 IQCDQ96DY2 449 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 ASB16Q96NS5 453 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 GCNAQ96QF7 691 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 CGRRF1Q99675 332 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 ACBD6Q9BR61 282 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 NUP58Q9BVL2 599 aa13.27□□□□□ -0.29
SHMT2-214ENST00000554604 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.29
SHMT2-214ENST00000554604 ZFHX2Q9C0A1 2572 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-214ENST00000554604 H0Y858 1186 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 OBSL1O75147 1896 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 PHACTR2O75167 634 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 MOSPD3O75425 235 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 CLSTN1O94985 981 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 ACAT1P24752 427 aaKnown RBP13.26□□□□□ -0.29
SHMT2-214ENST00000554604 GABRR2P28476 465 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 CASP14P31944 242 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 MTIF2P46199 727 aaKnown RBP13.26□□□□□ -0.29
SHMT2-214ENST00000554604 TRPC3Q13507 836 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 SOWAHAQ2M3V2 549 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 SLC44A4Q53GD3 710 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 ARHGAP15Q53QZ3 475 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 RIF1Q5UIP0 2472 aaKnown RBP13.26□□□□□ -0.29
SHMT2-214ENST00000554604 PHLDB3Q6NSJ2 640 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 POTEHQ6S545 545 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 DPH6Q7L8W6 267 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 TMC8Q8IU68 726 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 REXO1L1PQ8IX06 675 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 GIPC2Q8TF65 315 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 ATOH1Q92858 354 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-214ENST00000554604 CEP63Q96MT8 703 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 ERGIC2Q96RQ1 377 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 MMS19Q96T76 1030 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 PI4K2AQ9BTU6 479 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 TRMT61BQ9BVS5 477 aaKnown RBP13.26□□□□□ -0.29
SHMT2-214ENST00000554604 LRRC3Q9BY71 257 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 PLA2G2FQ9BZM2 168 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 ATXN3LQ9H3M9 355 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 BRD9Q9H8M2 597 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 SIT1Q9Y3P8 196 aa13.26□□□□□ -0.29
SHMT2-214ENST00000554604 PTPRDP23468 1912 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 NRG2O14511 850 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 DYNC1I1O14576 645 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 HAPLN1P10915 354 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 PRKCSHP14314 528 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 PSMC3P17980 439 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 ATF6P18850 670 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 FCARP24071 287 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 GRM2Q14416 872 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 MLF2Q15773 248 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 MAN2A1Q16706 1144 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 FIGNQ5HY92 759 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 INTS6LQ5JSJ4 861 aaKnown RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 MIIPQ5JXC2 388 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 GAREM2Q75VX8 874 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 ALYREFQ86V81 257 aaKnown RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 TMTC1Q8IUR5 882 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 CREBRFQ8IUR6 639 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 ZC3H3Q8IXZ2 948 aaKnown RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 DTWD2Q8NBA8 298 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 E2F7Q96AV8 911 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 ZNF334Q9HCZ1 680 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 PPP2R2CQ9Y2T4 447 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 PTPRZ1P23471 2315 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-214ENST00000554604 GREB1Q4ZG55 1949 aa13.25□□□□□ -0.29
SHMT2-214ENST00000554604 PDXKO00764 312 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 DPYSL4O14531 572 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 RIOK3O14730 519 aaKnown RBP13.24□□□□□ -0.29
SHMT2-214ENST00000554604 GABRDO14764 452 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 GNA14O95837 355 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 NR3C1P04150 777 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 DCNP07585 359 aaKnown RBP13.24□□□□□ -0.29
SHMT2-214ENST00000554604 CDC25CP30307 473 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 VIPR2P41587 438 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 STARD6P59095 220 aa13.24□□□□□ -0.29
SHMT2-214ENST00000554604 RPL10AP62906 217 aaKnown RBP13.24□□□□□ -0.29
SHMT2-214ENST00000554604 TNNC1P63316 161 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms