RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 XKR3Q5GH77 459 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 PLA2G4FQ68DD2 849 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 TRMT1LQ7Z2T5 733 aaKnown RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 MAMDC2Q7Z304 686 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 SYT2Q8N9I0 419 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 CNNM3Q8NE01 707 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 RASSF8Q8NHQ8 419 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 ATP8B4Q8TF62 1192 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 LARP4BQ92615 738 aaKnown RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 STAMQ92783 540 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 GLG1Q92896 1179 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 PAGE5Q96GU1 130 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 TIGD1Q96MW7 591 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 CEP89Q96ST8 783 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 PYM1Q9BRP8 204 aaKnown RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 CUEDC2Q9H467 287 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 RNPEPQ9H4A4 650 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 CLSTN2Q9H4D0 955 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 AZI2Q9H6S1 392 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 SPC25Q9HBM1 224 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 ANKEF1Q9NU02 776 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 ERAP1Q9NZ08 941 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 NDOR1Q9UHB4 597 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 DBR1Q9UK59 544 aaKnown RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 DNM3Q9UQ16 869 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 RWDD3Q9Y3V2 267 aa6.96□□□□□ -1.3
SCFD1-212ENST00000554486 TIMM13Q9Y5L4 95 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-212ENST00000554486 ARHGEF35A5YM69 484 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 HBP1O60381 514 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 NPHS1O60500 1241 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 KPNA6O60684 536 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 RFPL3O75679 317 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 TMEM253P0C7T8 217 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 CYP11B2P19099 503 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 CASP1P29466 404 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 YWHABP31946 246 aaKnown RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 RARRES1P49788 294 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 SLC26A2P50443 739 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 CORO7P57737 925 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 GPR85P60893 370 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 DHX8Q14562 1220 aaKnown RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 CAMK4Q16566 473 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 BRDTQ58F21 947 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 XKR9Q5GH70 373 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 RINT1Q6NUQ1 792 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 CAVIN1Q6NZI2 390 aaKnown RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 CXCL17Q6UXB2 119 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 ZNF662Q6ZS27 426 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 C1orf186Q6ZWK4 172 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 RNF180Q86T96 592 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 GPBP1Q86WP2 473 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 ELOA2Q8IYF1 753 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 CEP57L1Q8IYX8 460 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 SYNPOQ8N3V7 929 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 NUP43Q8NFH3 380 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 ERCC4Q92889 916 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 DNAJC19Q96DA6 116 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 FAM167AQ96KS9 214 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 DEFB118Q96PH6 123 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 C7orf25Q9BPX7 421 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 ZFYVE21Q9BQ24 234 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 SH2D3AQ9BRG2 576 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 MTG1Q9BT17 334 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 MCOLN1Q9GZU1 580 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 BHMT2Q9H2M3 363 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 TNMDQ9H2S6 317 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 MAGEF1Q9HAY2 307 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 PDLIM7Q9NR12 457 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 OGDHLQ9ULD0 1010 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 YBX2Q9Y2T7 364 aaKnown RBP6.95□□□□□ -1.3
SCFD1-212ENST00000554486 PCDHA9Q9Y5H5 950 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 GRIN2DO15399 1336 aa6.95□□□□□ -1.3
SCFD1-212ENST00000554486 BRCA2P51587 3418 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 KLRC4O43908 158 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 ZEB2O60315 1214 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 DNAJC8O75937 253 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-212ENST00000554486 RASGRP1O95267 797 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 CRTAMO95727 393 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 ASGR1P07306 291 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 GJB1P08034 283 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 SMIM10L2AP0DMW4 78 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 SMIM10L2BP0DMW5 78 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 INSRRP14616 1297 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 FPR2P25090 351 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 TACR1P25103 407 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 ACLYP53396 1101 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 MAPK7Q13164 816 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 PNOCQ13519 176 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 CUL4BQ13620 913 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 POSTNQ15063 836 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 KIAA0753Q2KHM9 967 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 ZNF484Q5JVG2 852 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 CCDC183Q5T5S1 534 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 CNNM4Q6P4Q7 775 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 RBM43Q6ZSC3 357 aaKnown RBP6.94□□□□□ -1.3
SCFD1-212ENST00000554486 OTUD6AQ7L8S5 288 aa6.94□□□□□ -1.3
SCFD1-212ENST00000554486 DAW1Q8N136 415 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms